Difference between revisions of "TSS:Hg 237073.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=ENST00000547233.1:55 NM_174886:-140 ENST00000401449.5:-222 |
|chr=chr17 | |chr=chr17 | ||
|cpg_percent=0.18 | |cpg_percent=0.18 | ||
| − | |distance= | + | |distance=55 |
| − | |distance_to_tss= | + | |distance_to_tss=332 |
|end=81399706 | |end=81399706 | ||
|end_of_center_position=3412149 | |end_of_center_position=3412149 | ||
| Line 11: | Line 11: | ||
|gene_alias=BAHD2 | |gene_alias=BAHD2 | ||
|gene_description=BAH domain and coiled-coil containing 1 | |gene_description=BAH domain and coiled-coil containing 1 | ||
| − | |gene_id= | + | |gene_id=7050 |
| − | |gene_name= | + | |gene_name=TGFB induced factor homeobox 1 |
| − | |gene_source=HGNC: | + | |gene_source=HGNC:11776 |
| − | |gene_symbol= | + | |gene_symbol=TGIF1 |
| − | |gene_synonyms= | + | |gene_synonyms= |
|gene_type=protein-coding | |gene_type=protein-coding | ||
| − | |hgnc_mgi_id=HGNC: | + | |hgnc_mgi_id=HGNC:11776 |
|nearest_ensembl=ENSG00000266074 | |nearest_ensembl=ENSG00000266074 | ||
|nearest_promoter_id=NM_001291324 | |nearest_promoter_id=NM_001291324 | ||
|nearest_refseq=NM_024696 | |nearest_refseq=NM_024696 | ||
|nearest_unigene=Hs.514580 | |nearest_unigene=Hs.514580 | ||
| − | |num_trans= | + | |num_trans=3 |
|species=human | |species=human | ||
|start=81399705 | |start=81399705 | ||
|start_of_center_position=3412148 | |start_of_center_position=3412148 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name=ENST00000547233.1 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_237073.1 | |tss_id=hg_237073.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id= |
}} | }} | ||
Revision as of 14:11, 17 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 3412148 |
|---|---|
| End of the center position in the TSS region: | 3412149 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000547233.1 |
|---|---|
| Distance: | 55 |
| Num_trans: | 3 |
| All_trans: | ENST00000547233.1:55 NM_174886:-140 ENST00000401449.5:-222 |
TATA-Box annotation
| Distance to TSS: | 332 |
|---|---|
| Nearest PromoterID: | NM_001291324 |
| Entrez ID: | 57597 |
| Nearest Unigene: | Hs.514580 |
| Nearest Refseq: | NM_024696 |
| Nearest Ensembl: | ENSG00000266074 |
| Gene Name: | TGFB induced factor homeobox 1 |
| Gene Alias: | BAHD2 |
| Gene Description: | BAH domain and coiled-coil containing 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.18 |
| GC%: | 0.825871 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
