Difference between revisions of "TSS:Hg 237878.1"
From referenceTSS
| Line 3: | Line 3: | ||
|chr=chr19 | |chr=chr19 | ||
|cpg_percent=0.04 | |cpg_percent=0.04 | ||
| − | |distance= | + | |distance=NA |
|distance_to_tss=54 | |distance_to_tss=54 | ||
|end=51646825 | |end=51646825 | ||
| Line 12: | Line 12: | ||
|gene_description=sialic acid binding Ig like lectin 14 | |gene_description=sialic acid binding Ig like lectin 14 | ||
|gene_id=100049587 | |gene_id=100049587 | ||
| − | |gene_name= | + | |gene_name=SIGLEC14 |
|gene_source=HGNC:32926 | |gene_source=HGNC:32926 | ||
|gene_symbol=SIGLEC14 | |gene_symbol=SIGLEC14 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_001098612 | |nearest_refseq=NM_001098612 | ||
|nearest_unigene=Hs.707374 | |nearest_unigene=Hs.707374 | ||
| − | |num_trans= | + | |num_trans=0 |
|species=human | |species=human | ||
|start=51646824 | |start=51646824 | ||
|start_of_center_position=9309442 | |start_of_center_position=9309442 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name= |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_237878.1 | |tss_id=hg_237878.1 | ||
Revision as of 14:30, 17 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 9309442 |
|---|---|
| End of the center position in the TSS region: | 9309443 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: | ENST00000360844.6:24 uc002pxf.5:24 AK298284:24 ENST00000599649.5:25 uc061bye.1:25 AY854038:25 NM_001098612:-54 ENST00000429354.3:-64 uc061byf.1:-64 AY358369:70 |
TATA-Box annotation
| Distance to TSS: | 54 |
|---|---|
| Nearest PromoterID: | NM_001098612 |
| Entrez ID: | 100049587 |
| Nearest Unigene: | Hs.707374 |
| Nearest Refseq: | NM_001098612 |
| Nearest Ensembl: | ENSG00000254415 |
| Gene Name: | SIGLEC14 |
| Gene Alias: | - |
| Gene Description: | sialic acid binding Ig like lectin 14 |
| Gene Type: | protein-coding |
| CpG%: | 0.04 |
| GC%: | 0.646766 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
