Difference between revisions of "TSS:Hg 240979.1"
From referenceTSS
| Line 6: | Line 6: | ||
|WHS= | |WHS= | ||
|WHSC1= | |WHSC1= | ||
| + | |all_trans=ENST00000564719.2:39 NM_001257308:39 | ||
|chr=chr4 | |chr=chr4 | ||
|cpg_percent=0.02 | |cpg_percent=0.02 | ||
| − | |distance= | + | |distance=39 |
|distance_to_tss=30009 | |distance_to_tss=30009 | ||
|end=1930641 | |end=1930641 | ||
| Line 14: | Line 15: | ||
|entrez_id=7468 | |entrez_id=7468 | ||
|gc_percent=0.487562 | |gc_percent=0.487562 | ||
| − | |gene_alias=KMT3F | + | |gene_alias=KMT3F{{!}}KMT3G{{!}}MMSET{{!}}REIIBP{{!}}TRX5{{!}}WHS{{!}}WHSC1 |
|gene_description=nuclear receptor binding SET domain protein 2 | |gene_description=nuclear receptor binding SET domain protein 2 | ||
| − | |gene_name= | + | |gene_id=100127206 |
| + | |gene_name=membrane integral NOTCH2 associated receptor 2 | ||
| + | |gene_source=HGNC:33914 | ||
| + | |gene_symbol=MINAR2 | ||
| + | |gene_synonyms= | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:33914 | ||
|nearest_ensembl=ENSG00000109685 | |nearest_ensembl=ENSG00000109685 | ||
|nearest_promoter_id=NM_133334 | |nearest_promoter_id=NM_133334 | ||
|nearest_refseq=NM_007331 | |nearest_refseq=NM_007331 | ||
|nearest_unigene=Hs.113876 | |nearest_unigene=Hs.113876 | ||
| − | |num_trans= | + | |num_trans=2 |
|species=human | |species=human | ||
|start=1930628 | |start=1930628 | ||
|start_of_center_position=129748054 | |start_of_center_position=129748054 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=ENST00000564719.2 NM_001257308 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_240979.1 | |tss_id=hg_240979.1 | ||
|tss_score=1 | |tss_score=1 | ||
| + | |uniprot_id=P59773 | ||
}} | }} | ||
Revision as of 15:41, 17 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 129748054 |
|---|---|
| End of the center position in the TSS region: | 129748055 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000564719.2 NM_001257308 |
|---|---|
| Distance: | 39 |
| Num_trans: | 2 |
| All_trans: | ENST00000564719.2:39 NM_001257308:39 |
TATA-Box annotation
| Distance to TSS: | 30009 |
|---|---|
| Nearest PromoterID: | NM_133334 |
| Entrez ID: | 7468 |
| Nearest Unigene: | Hs.113876 |
| Nearest Refseq: | NM_007331 |
| Nearest Ensembl: | ENSG00000109685 |
| Gene Name: | membrane integral NOTCH2 associated receptor 2 |
| Gene Alias: | KMT3F|KMT3G|MMSET|REIIBP|TRX5|WHS|WHSC1 |
| Gene Description: | nuclear receptor binding SET domain protein 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.02 |
| GC%: | 0.487562 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
