Difference between revisions of "TSS:Hg 242795.1"
From referenceTSS
| Line 5: | Line 5: | ||
|WBSCR5= | |WBSCR5= | ||
|WSCR5= | |WSCR5= | ||
| − | |all_trans= | + | |all_trans=ENST00000256246.5:-8 AF285605:-8 BC140934:-83 |
|chr=chr7 | |chr=chr7 | ||
|cpg_percent=0.055 | |cpg_percent=0.055 | ||
| − | |distance= | + | |distance=-8 |
| − | |distance_to_tss= | + | |distance_to_tss=-149 |
|end=74209857 | |end=74209857 | ||
|end_of_center_position=30849009 | |end_of_center_position=30849009 | ||
|entrez_id=7462 | |entrez_id=7462 | ||
|gc_percent=0.59204 | |gc_percent=0.59204 | ||
| − | |gene_alias=HSPC046 | + | |gene_alias=HSPC046{{!}}LAB{{!}}NTAL{{!}}WBSCR15{{!}}WBSCR5{{!}}WSCR5 |
| − | |gene_description=linker for activation of T | + | |gene_description=linker for activation of T cells family member 2 |
| − | |gene_id= | + | |gene_id=56154 |
| − | |gene_name= | + | |gene_name=testis expressed 15, meiosis and synapsis associated |
| − | |gene_source=HGNC: | + | |gene_source=HGNC:11738 |
| − | |gene_symbol= | + | |gene_symbol=TEX15 |
| − | |gene_synonyms= | + | |gene_synonyms=CT42 |
|gene_type=protein-coding | |gene_type=protein-coding | ||
| − | |hgnc_mgi_id=HGNC: | + | |hgnc_mgi_id=HGNC:11738 |
|nearest_ensembl=ENSG00000086730 | |nearest_ensembl=ENSG00000086730 | ||
|nearest_promoter_id=NM_032463 | |nearest_promoter_id=NM_032463 | ||
|nearest_refseq=NM_014146 | |nearest_refseq=NM_014146 | ||
|nearest_unigene=Hs.741249 | |nearest_unigene=Hs.741249 | ||
| − | |num_trans= | + | |num_trans=3 |
|species=human | |species=human | ||
|start=74209856 | |start=74209856 | ||
|start_of_center_position=30849008 | |start_of_center_position=30849008 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name=ENST00000256246.5 AF285605 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_242795.1 | |tss_id=hg_242795.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id=Q9BXT5 |
}} | }} | ||
Revision as of 16:23, 17 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 30849008 |
|---|---|
| End of the center position in the TSS region: | 30849009 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000256246.5 AF285605 |
|---|---|
| Distance: | -8 |
| Num_trans: | 3 |
| All_trans: | ENST00000256246.5:-8 AF285605:-8 BC140934:-83 |
TATA-Box annotation
| Distance to TSS: | -149 |
|---|---|
| Nearest PromoterID: | NM_032463 |
| Entrez ID: | 7462 |
| Nearest Unigene: | Hs.741249 |
| Nearest Refseq: | NM_014146 |
| Nearest Ensembl: | ENSG00000086730 |
| Gene Name: | testis expressed 15, meiosis and synapsis associated |
| Gene Alias: | HSPC046|LAB|NTAL|WBSCR15|WBSCR5|WSCR5 |
| Gene Description: | linker for activation of T cells family member 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.055 |
| GC%: | 0.59204 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
