Difference between revisions of "TSS:Hg 243031.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=ENST00000413712.6:-62 AK172815:-62 |
|chr=chr8 | |chr=chr8 | ||
|cpg_percent=0.12 | |cpg_percent=0.12 | ||
| − | |distance=- | + | |distance=-62 |
|distance_to_tss=-20 | |distance_to_tss=-20 | ||
|end=143708031 | |end=143708031 | ||
| Line 11: | Line 11: | ||
|gene_alias=- | |gene_alias=- | ||
|gene_description=uncharacterized LOC101928160 | |gene_description=uncharacterized LOC101928160 | ||
| − | |gene_id= | + | |gene_id=23731 |
| − | |gene_name= | + | |gene_name=transmembrane protein 245 |
| − | |gene_source=HGNC: | + | |gene_source=HGNC:1363 |
| − | |gene_symbol= | + | |gene_symbol=TMEM245 |
| − | |gene_synonyms= | + | |gene_synonyms=CG-2 |
|gene_type=ncRNA | |gene_type=ncRNA | ||
| − | |hgnc_mgi_id=HGNC: | + | |hgnc_mgi_id=HGNC:1363 |
|nearest_ensembl=ENSG00000181135 | |nearest_ensembl=ENSG00000181135 | ||
|nearest_promoter_id=NR_134306 | |nearest_promoter_id=NR_134306 | ||
|nearest_refseq=NR_134306 | |nearest_refseq=NR_134306 | ||
|nearest_unigene=Hs.735510 | |nearest_unigene=Hs.735510 | ||
| − | |num_trans= | + | |num_trans=2 |
|species=human | |species=human | ||
|start=143708030 | |start=143708030 | ||
|start_of_center_position=109087230 | |start_of_center_position=109087230 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=ENST00000413712.6 AK172815 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_243031.1 | |tss_id=hg_243031.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id=H7C0G1 |
}} | }} | ||
Revision as of 16:29, 17 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 109087230 |
|---|---|
| End of the center position in the TSS region: | 109087231 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000413712.6 AK172815 |
|---|---|
| Distance: | -62 |
| Num_trans: | 2 |
| All_trans: | ENST00000413712.6:-62 AK172815:-62 |
TATA-Box annotation
| Distance to TSS: | -20 |
|---|---|
| Nearest PromoterID: | NR_134306 |
| Entrez ID: | 101928160 |
| Nearest Unigene: | Hs.735510 |
| Nearest Refseq: | NR_134306 |
| Nearest Ensembl: | ENSG00000181135 |
| Gene Name: | transmembrane protein 245 |
| Gene Alias: | - |
| Gene Description: | uncharacterized LOC101928160 |
| Gene Type: | ncRNA |
| CpG%: | 0.12 |
| GC%: | 0.696517 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
