Difference between revisions of "TSS:Hg 243069.1"
From referenceTSS
| Line 5: | Line 5: | ||
|PHP32= | |PHP32= | ||
|SMAPME= | |SMAPME= | ||
| + | |all_trans=AK022854:98 ENST00000674048.1:-414 | ||
|chr=chr8 | |chr=chr8 | ||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
| − | |distance= | + | |distance=98 |
| − | |distance_to_tss= | + | |distance_to_tss=16150 |
|end=18067053 | |end=18067053 | ||
|end_of_center_position=114425657 | |end_of_center_position=114425657 | ||
|entrez_id=427 | |entrez_id=427 | ||
|gc_percent=0.462687 | |gc_percent=0.462687 | ||
| − | |gene_alias=AC | + | |gene_alias=AC{{!}}ACDase{{!}}ASAH{{!}}PHP{{!}}PHP32{{!}}SMAPME |
|gene_description=N-acylsphingosine amidohydrolase 1 | |gene_description=N-acylsphingosine amidohydrolase 1 | ||
| − | |gene_name= | + | |gene_id=25861 |
| + | |gene_name=whirlin | ||
| + | |gene_source=HGNC:16361 | ||
| + | |gene_symbol=WHRN | ||
| + | |gene_synonyms=CIP98 PDZD7B USH2D | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:16361 | ||
|nearest_ensembl=ENSG00000104763 | |nearest_ensembl=ENSG00000104763 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001363743 |
|nearest_refseq=NM_004315 | |nearest_refseq=NM_004315 | ||
|nearest_unigene=Hs.527412 | |nearest_unigene=Hs.527412 | ||
| − | |num_trans= | + | |num_trans=2 |
|species=human | |species=human | ||
|start=18067038 | |start=18067038 | ||
|start_of_center_position=114425656 | |start_of_center_position=114425656 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name=AK022854 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_243069.1 | |tss_id=hg_243069.1 | ||
|tss_score=1 | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Revision as of 16:30, 17 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 114425656 |
|---|---|
| End of the center position in the TSS region: | 114425657 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | AK022854 |
|---|---|
| Distance: | 98 |
| Num_trans: | 2 |
| All_trans: | AK022854:98 ENST00000674048.1:-414 |
TATA-Box annotation
| Distance to TSS: | 16150 |
|---|---|
| Nearest PromoterID: | NM_001363743 |
| Entrez ID: | 427 |
| Nearest Unigene: | Hs.527412 |
| Nearest Refseq: | NM_004315 |
| Nearest Ensembl: | ENSG00000104763 |
| Gene Name: | whirlin |
| Gene Alias: | AC|ACDase|ASAH|PHP|PHP32|SMAPME |
| Gene Description: | N-acylsphingosine amidohydrolase 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.01 |
| GC%: | 0.462687 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
