Difference between revisions of "TSS:Hg 243130.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=NM_001257975:-38 AK296363:-38 ENST00000538431.5:127 ENST00000324544.6:289 ENST00000357558.9:477 AK292713:486 AK316393:486 ENST00000372938.10:494 ENST00000629610.2:494 NM_001131018:494 NM_001131017:494 NM_001257976:494 NM_001131016:494 AK303288:494 AK303636:494 AK027287:494 ENST00000372954.5:498 BC021163:498 |
|chr=chr8 | |chr=chr8 | ||
|cpg_percent=0.005 | |cpg_percent=0.005 | ||
| − | |distance= | + | |distance=-38 |
| − | |distance_to_tss= | + | |distance_to_tss=5106 |
|end=30643687 | |end=30643687 | ||
|end_of_center_position=128192066 | |end_of_center_position=128192066 | ||
| Line 11: | Line 11: | ||
|gene_alias=- | |gene_alias=- | ||
|gene_description=small integral membrane protein 18 | |gene_description=small integral membrane protein 18 | ||
| − | |gene_id= | + | |gene_id=25792 |
| − | |gene_name= | + | |gene_name=CDKN1A interacting zinc finger protein 1 |
| − | |gene_source=HGNC: | + | |gene_source=HGNC:16744 |
| − | |gene_symbol= | + | |gene_symbol=CIZ1 |
| − | |gene_synonyms= | + | |gene_synonyms=LSFR1 ZNF356 |
|gene_type=protein-coding | |gene_type=protein-coding | ||
| − | |hgnc_mgi_id=HGNC: | + | |hgnc_mgi_id=HGNC:16744 |
|nearest_ensembl=ENSG00000253457 | |nearest_ensembl=ENSG00000253457 | ||
|nearest_promoter_id=NM_001206847 | |nearest_promoter_id=NM_001206847 | ||
|nearest_refseq=NM_001206847 | |nearest_refseq=NM_001206847 | ||
|nearest_unigene=Hs.659493 | |nearest_unigene=Hs.659493 | ||
| − | |num_trans= | + | |num_trans=18 |
|species=human | |species=human | ||
|start=30643685 | |start=30643685 | ||
|start_of_center_position=128192065 | |start_of_center_position=128192065 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name=NM_001257975 AK296363 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_243130.1 | |tss_id=hg_243130.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id=B7Z3U7 Q9ULV3 |
}} | }} | ||
Revision as of 16:31, 17 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 128192065 |
|---|---|
| End of the center position in the TSS region: | 128192066 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | NM_001257975 AK296363 |
|---|---|
| Distance: | -38 |
| Num_trans: | 18 |
| All_trans: | NM_001257975:-38 AK296363:-38 ENST00000538431.5:127 ENST00000324544.6:289 ENST00000357558.9:477 AK292713:486 AK316393:486 ENST00000372938.10:494 ENST00000629610.2:494 NM_001131018:494 NM_001131017:494 NM_001257976:494 NM_001131016:494 AK303288:494 AK303636:494 AK027287:494 ENST00000372954.5:498 BC021163:498 |
TATA-Box annotation
| Distance to TSS: | 5106 |
|---|---|
| Nearest PromoterID: | NM_001206847 |
| Entrez ID: | 100507341 |
| Nearest Unigene: | Hs.659493 |
| Nearest Refseq: | NM_001206847 |
| Nearest Ensembl: | ENSG00000253457 |
| Gene Name: | CDKN1A interacting zinc finger protein 1 |
| Gene Alias: | - |
| Gene Description: | small integral membrane protein 18 |
| Gene Type: | protein-coding |
| CpG%: | 0.005 |
| GC%: | 0.393035 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
