Difference between revisions of "TSS:Hg 243335.1"
From referenceTSS
| Line 6: | Line 6: | ||
|TINF1= | |TINF1= | ||
|TNKS1= | |TNKS1= | ||
| − | |all_trans= | + | |all_trans=ENST00000359047.2:64 AF350881:64 AK057748:64 ENST00000360774.6:237 NM_017662:237 AY333282:239 AY333285:239 AY333286:239 AY333287:239 AY333288:239 AF448232:302 BC156137:302 ENST00000449912.6:438 NM_001177310:438 AY333283:438 |
|chr=chr8 | |chr=chr8 | ||
|cpg_percent=0.005 | |cpg_percent=0.005 | ||
| − | |distance= | + | |distance=64 |
| − | |distance_to_tss= | + | |distance_to_tss=19084 |
|end=9574996 | |end=9574996 | ||
|end_of_center_position=74888158 | |end_of_center_position=74888158 | ||
|entrez_id=8658 | |entrez_id=8658 | ||
|gc_percent=0.393035 | |gc_percent=0.393035 | ||
| − | |gene_alias=ARTD5 | + | |gene_alias=ARTD5{{!}}PARP-5a{{!}}PARP5A{{!}}PARPL{{!}}TIN1{{!}}TINF1{{!}}TNKS1{{!}}pART5 |
|gene_description=tankyrase | |gene_description=tankyrase | ||
| − | |gene_id= | + | |gene_id=140803 |
| − | |gene_name= | + | |gene_name=transient receptor potential cation channel subfamily M member 6 |
| − | |gene_source=HGNC: | + | |gene_source=HGNC:17995 |
| − | |gene_symbol= | + | |gene_symbol=TRPM6 |
| − | |gene_synonyms= | + | |gene_synonyms=CHAK2 FLJ22628 |
|gene_type=protein-coding | |gene_type=protein-coding | ||
| − | |hgnc_mgi_id=HGNC: | + | |hgnc_mgi_id=HGNC:17995 |
|nearest_ensembl=ENSG00000173273 | |nearest_ensembl=ENSG00000173273 | ||
|nearest_promoter_id=NM_003747 | |nearest_promoter_id=NM_003747 | ||
|nearest_refseq=NM_003747 | |nearest_refseq=NM_003747 | ||
|nearest_unigene=Hs.370267 | |nearest_unigene=Hs.370267 | ||
| − | |num_trans= | + | |num_trans=15 |
|pART5= | |pART5= | ||
|species=human | |species=human | ||
| Line 34: | Line 34: | ||
|start_of_center_position=74888157 | |start_of_center_position=74888157 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name=ENST00000359047.2 AF350881 AK057748 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_243335.1 | |tss_id=hg_243335.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id=Q96LV9 |
}} | }} | ||
Revision as of 16:36, 17 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 74888157 |
|---|---|
| End of the center position in the TSS region: | 74888158 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000359047.2 AF350881 AK057748 |
|---|---|
| Distance: | 64 |
| Num_trans: | 15 |
| All_trans: | ENST00000359047.2:64 AF350881:64 AK057748:64 ENST00000360774.6:237 NM_017662:237 AY333282:239 AY333285:239 AY333286:239 AY333287:239 AY333288:239 AF448232:302 BC156137:302 ENST00000449912.6:438 NM_001177310:438 AY333283:438 |
TATA-Box annotation
| Distance to TSS: | 19084 |
|---|---|
| Nearest PromoterID: | NM_003747 |
| Entrez ID: | 8658 |
| Nearest Unigene: | Hs.370267 |
| Nearest Refseq: | NM_003747 |
| Nearest Ensembl: | ENSG00000173273 |
| Gene Name: | transient receptor potential cation channel subfamily M member 6 |
| Gene Alias: | ARTD5|PARP-5a|PARP5A|PARPL|TIN1|TINF1|TNKS1|pART5 |
| Gene Description: | tankyrase |
| Gene Type: | protein-coding |
| CpG%: | 0.005 |
| GC%: | 0.393035 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
