Difference between revisions of "TSS:Hg 243390.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
|CTR2= | |CTR2= | ||
| − | |all_trans= | + | |all_trans=AK316583:-6 AK223395:52 ENST00000375326.9:117 NM_000507:117 M19922:124 BC012927:128 L10320:216 AY544122:238 D26054:319 D26055:319 D26056:319 KJ891148:323 KR709624:323 KR709625:323 KR709626:323 KR709627:323 KR712246:323 KR712249:323 CU680450:323 AF073475:328 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.005 | |cpg_percent=0.005 | ||
| − | |distance= | + | |distance=-6 |
| − | |distance_to_tss= | + | |distance_to_tss=33388 |
|end=113184395 | |end=113184395 | ||
|end_of_center_position=94639635 | |end_of_center_position=94639635 | ||
|entrez_id=1318 | |entrez_id=1318 | ||
|gc_percent=0.368159 | |gc_percent=0.368159 | ||
| − | |gene_alias=COPT2 | + | |gene_alias=COPT2{{!}}CTR2{{!}}hCTR2 |
|gene_description=solute carrier family 31 member 2 | |gene_description=solute carrier family 31 member 2 | ||
| − | |gene_id= | + | |gene_id=2203 |
| − | |gene_name= | + | |gene_name=fructose-bisphosphatase 1 |
| − | |gene_source=HGNC: | + | |gene_source=HGNC:3606 |
| − | |gene_symbol= | + | |gene_symbol=FBP1 |
| − | |gene_synonyms= | + | |gene_synonyms= |
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hCTR2= | |hCTR2= | ||
| − | |hgnc_mgi_id=HGNC: | + | |hgnc_mgi_id=HGNC:3606 |
|nearest_ensembl=ENSG00000136867 | |nearest_ensembl=ENSG00000136867 | ||
|nearest_promoter_id=NM_001860 | |nearest_promoter_id=NM_001860 | ||
|nearest_refseq=NM_001860 | |nearest_refseq=NM_001860 | ||
|nearest_unigene=Hs.24030 | |nearest_unigene=Hs.24030 | ||
| − | |num_trans= | + | |num_trans=20 |
|species=human | |species=human | ||
|start=113184394 | |start=113184394 | ||
|start_of_center_position=94639634 | |start_of_center_position=94639634 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=AK316583 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_243390.1 | |tss_id=hg_243390.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id=B2RE74 |
}} | }} | ||
Revision as of 16:37, 17 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 94639634 |
|---|---|
| End of the center position in the TSS region: | 94639635 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | AK316583 |
|---|---|
| Distance: | -6 |
| Num_trans: | 20 |
| All_trans: | AK316583:-6 AK223395:52 ENST00000375326.9:117 NM_000507:117 M19922:124 BC012927:128 L10320:216 AY544122:238 D26054:319 D26055:319 D26056:319 KJ891148:323 KR709624:323 KR709625:323 KR709626:323 KR709627:323 KR712246:323 KR712249:323 CU680450:323 AF073475:328 |
TATA-Box annotation
| Distance to TSS: | 33388 |
|---|---|
| Nearest PromoterID: | NM_001860 |
| Entrez ID: | 1318 |
| Nearest Unigene: | Hs.24030 |
| Nearest Refseq: | NM_001860 |
| Nearest Ensembl: | ENSG00000136867 |
| Gene Name: | fructose-bisphosphatase 1 |
| Gene Alias: | COPT2|CTR2|hCTR2 |
| Gene Description: | solute carrier family 31 member 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.005 |
| GC%: | 0.368159 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
