Difference between revisions of "TSS:Hg 243405.1"
From referenceTSS
| Line 3: | Line 3: | ||
|HEL-S-153w= | |HEL-S-153w= | ||
|ORM= | |ORM= | ||
| + | |all_trans=ENST00000341170.5:312 NM_139246:312 AK128615:335 BX538308:360 BX648493:362 BC035604:363 ENST00000375172.6:379 AK094043:379 AK291199:379 | ||
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.025 | |cpg_percent=0.025 | ||
| − | |distance= | + | |distance=312 |
|distance_to_tss=773 | |distance_to_tss=773 | ||
|end=114323799 | |end=114323799 | ||
| Line 11: | Line 12: | ||
|entrez_id=5004 | |entrez_id=5004 | ||
|gc_percent=0.527363 | |gc_percent=0.527363 | ||
| − | |gene_alias=AGP-A | + | |gene_alias=AGP-A{{!}}AGP1{{!}}HEL-S-153w{{!}}ORM |
|gene_description=orosomucoid 1 | |gene_description=orosomucoid 1 | ||
| − | |gene_name= | + | |gene_id=158427 |
| + | |gene_name=thiosulfate sulfurtransferase like domain containing 2 | ||
| + | |gene_source=HGNC:30087 | ||
| + | |gene_symbol=TSTD2 | ||
| + | |gene_synonyms=PP4189 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:30087 | ||
|nearest_ensembl=ENSG00000229314 | |nearest_ensembl=ENSG00000229314 | ||
|nearest_promoter_id=NM_000607 | |nearest_promoter_id=NM_000607 | ||
|nearest_refseq=NM_000607 | |nearest_refseq=NM_000607 | ||
|nearest_unigene=Hs.522356 | |nearest_unigene=Hs.522356 | ||
| − | |num_trans= | + | |num_trans=9 |
|species=human | |species=human | ||
|start=114323793 | |start=114323793 | ||
|start_of_center_position=97633679 | |start_of_center_position=97633679 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=ENST00000341170.5 NM_139246 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_243405.1 | |tss_id=hg_243405.1 | ||
|tss_score=1 | |tss_score=1 | ||
| + | |uniprot_id=Q5T7W7 | ||
}} | }} | ||
Revision as of 16:38, 17 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 97633679 |
|---|---|
| End of the center position in the TSS region: | 97633680 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000341170.5 NM_139246 |
|---|---|
| Distance: | 312 |
| Num_trans: | 9 |
| All_trans: | ENST00000341170.5:312 NM_139246:312 AK128615:335 BX538308:360 BX648493:362 BC035604:363 ENST00000375172.6:379 AK094043:379 AK291199:379 |
TATA-Box annotation
| Distance to TSS: | 773 |
|---|---|
| Nearest PromoterID: | NM_000607 |
| Entrez ID: | 5004 |
| Nearest Unigene: | Hs.522356 |
| Nearest Refseq: | NM_000607 |
| Nearest Ensembl: | ENSG00000229314 |
| Gene Name: | thiosulfate sulfurtransferase like domain containing 2 |
| Gene Alias: | AGP-A|AGP1|HEL-S-153w|ORM |
| Gene Description: | orosomucoid 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.025 |
| GC%: | 0.527363 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
