Difference between revisions of "TSS:Hg 243481.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=Y17170:-16 AK126611:29 AF054990:40 AB019564:-76 BC006998:98 BC035832:-104 Y17174:124 BC035825:-151 BC008007:-159 AB462504:-162 BC018940:-167 BC000845:-170 U25123:-174 AY029066:-175 X51525:-186 LF641695:-187 LF641696:-187 LF641697:-187 LQ059297:-187 LQ059298:-187 LQ059299:-187 MA264841:-187 MA264842:-187 MA264843:-187 MS942517:-187 MS942518:-187 MS942519:-187 AK026634:-188 BC018865:227 DQ593671:381 S64650:-382 AK026170:440 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
| − | |distance= | + | |distance=-16 |
|distance_to_tss=49765 | |distance_to_tss=49765 | ||
|end=129919370 | |end=129919370 | ||
| Line 12: | Line 12: | ||
|gene_description=microRNA 6855 | |gene_description=microRNA 6855 | ||
|gene_id=23048 | |gene_id=23048 | ||
| − | |gene_name= | + | |gene_name=MIR6855 |
|gene_source=HGNC:17069 | |gene_source=HGNC:17069 | ||
|gene_symbol=FNBP1 | |gene_symbol=FNBP1 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NR_106914 | |nearest_refseq=NR_106914 | ||
|nearest_unigene= | |nearest_unigene= | ||
| − | |num_trans= | + | |num_trans=32 |
|species=human | |species=human | ||
|start=129919369 | |start=129919369 | ||
|start_of_center_position=1861 | |start_of_center_position=1861 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=Y17170 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_243481.1 | |tss_id=hg_243481.1 | ||
Revision as of 16:39, 17 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 1861 |
|---|---|
| End of the center position in the TSS region: | 1862 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | Y17170 |
|---|---|
| Distance: | -16 |
| Num_trans: | 32 |
| All_trans: | Y17170:-16 AK126611:29 AF054990:40 AB019564:-76 BC006998:98 BC035832:-104 Y17174:124 BC035825:-151 BC008007:-159 AB462504:-162 BC018940:-167 BC000845:-170 U25123:-174 AY029066:-175 X51525:-186 LF641695:-187 LF641696:-187 LF641697:-187 LQ059297:-187 LQ059298:-187 LQ059299:-187 MA264841:-187 MA264842:-187 MA264843:-187 MS942517:-187 MS942518:-187 MS942519:-187 AK026634:-188 BC018865:227 DQ593671:381 S64650:-382 AK026170:440 |
TATA-Box annotation
| Distance to TSS: | 49765 |
|---|---|
| Nearest PromoterID: | NR_106914 |
| Entrez ID: | 102466750 |
| Nearest Unigene: | |
| Nearest Refseq: | NR_106914 |
| Nearest Ensembl: | ENSG00000276124 |
| Gene Name: | MIR6855 |
| Gene Alias: | hsa-mir-6855 |
| Gene Description: | microRNA 6855 |
| Gene Type: | ncRNA |
| CpG%: | 0.01 |
| GC%: | 0.273632 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
