Difference between revisions of "TSS:Hg 244324.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENST00000469223.5:10 uc064zaj.1:10 ENST00000376643.6:-83 uc064zai.1:-83 AK302926:97 ENST00000376610.6:166 uc064zak.1:166 ENST00000483656.5:208 uc064zal....") |
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{{TSSDetail | {{TSSDetail | ||
| + | |HD6= | ||
| + | |JM21= | ||
| + | |PPP1R90= | ||
|all_trans=ENST00000469223.5:10 uc064zaj.1:10 ENST00000376643.6:-83 uc064zai.1:-83 AK302926:97 ENST00000376610.6:166 uc064zak.1:166 ENST00000483656.5:208 uc064zal.1:208 ENST00000334136.9:212 uc004dks.2:212 ENST00000462730.5:233 uc064zam.1:233 ENST00000376619.6:251 uc004dkt.2:251 ENST00000477528.5:272 uc010nig.2:272 AL137696:272 ENST00000465269.5:281 uc064zan.1:281 BC005872:281 AK024083:291 NM_006044:297 AJ011972:297 ENST00000476625.5:299 uc064zao.1:299 AB020708:318 BC069243:319 ENST00000477561.5:327 uc064zap.1:327 AK295884:382 ENST00000438518.5:-387 uc064zah.1:-387 ENST00000481929.5:403 uc064zaq.1:403 ENST00000441703.5:404 uc064zar.1:404 ENST00000423941.5:-406 uc064zag.1:-406 BC011498:407 ENST00000426196.5:409 uc064zas.1:409 AK095124:410 ENST00000489352.5:424 uc064zat.1:424 | |all_trans=ENST00000469223.5:10 uc064zaj.1:10 ENST00000376643.6:-83 uc064zai.1:-83 AK302926:97 ENST00000376610.6:166 uc064zak.1:166 ENST00000483656.5:208 uc064zal.1:208 ENST00000334136.9:212 uc004dks.2:212 ENST00000462730.5:233 uc064zam.1:233 ENST00000376619.6:251 uc004dkt.2:251 ENST00000477528.5:272 uc010nig.2:272 AL137696:272 ENST00000465269.5:281 uc064zan.1:281 BC005872:281 AK024083:291 NM_006044:297 AJ011972:297 ENST00000476625.5:299 uc064zao.1:299 AB020708:318 BC069243:319 ENST00000477561.5:327 uc064zap.1:327 AK295884:382 ENST00000438518.5:-387 uc064zah.1:-387 ENST00000481929.5:403 uc064zaq.1:403 ENST00000441703.5:404 uc064zar.1:404 ENST00000423941.5:-406 uc064zag.1:-406 BC011498:407 ENST00000426196.5:409 uc064zas.1:409 AK095124:410 ENST00000489352.5:424 uc064zat.1:424 | ||
|chr=chrX | |chr=chrX | ||
| Line 8: | Line 11: | ||
|entrez_id=10013 | |entrez_id=10013 | ||
|gc_percent=0.701493 | |gc_percent=0.701493 | ||
| − | |gene_alias=CPBHM | + | |gene_alias=CPBHM{{!}}HD6{{!}}JM21{{!}}PPP1R90 |
|gene_description=histone deacetylase 6 | |gene_description=histone deacetylase 6 | ||
|gene_id=10013 | |gene_id=10013 | ||
| − | |gene_name= | + | |gene_name=HDAC6 |
|gene_source=HGNC:14064 | |gene_source=HGNC:14064 | ||
|gene_symbol=HDAC6 | |gene_symbol=HDAC6 | ||
Latest revision as of 16:59, 17 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000469223.5 uc064zaj.1 |
|---|---|
| Distance: | 10 |
| Num_trans: | 45 |
| All_trans: | ENST00000469223.5:10 uc064zaj.1:10 ENST00000376643.6:-83 uc064zai.1:-83 AK302926:97 ENST00000376610.6:166 uc064zak.1:166 ENST00000483656.5:208 uc064zal.1:208 ENST00000334136.9:212 uc004dks.2:212 ENST00000462730.5:233 uc064zam.1:233 ENST00000376619.6:251 uc004dkt.2:251 ENST00000477528.5:272 uc010nig.2:272 AL137696:272 ENST00000465269.5:281 uc064zan.1:281 BC005872:281 AK024083:291 NM_006044:297 AJ011972:297 ENST00000476625.5:299 uc064zao.1:299 AB020708:318 BC069243:319 ENST00000477561.5:327 uc064zap.1:327 AK295884:382 ENST00000438518.5:-387 uc064zah.1:-387 ENST00000481929.5:403 uc064zaq.1:403 ENST00000441703.5:404 uc064zar.1:404 ENST00000423941.5:-406 uc064zag.1:-406 BC011498:407 ENST00000426196.5:409 uc064zas.1:409 AK095124:410 ENST00000489352.5:424 uc064zat.1:424 |
TATA-Box annotation
| Distance to TSS: | -166 |
|---|---|
| Nearest PromoterID: | NM_001321229 |
| Entrez ID: | 10013 |
| Nearest Unigene: | Hs.6764 |
| Nearest Refseq: | NM_006044 |
| Nearest Ensembl: | ENSG00000094631 |
| Gene Name: | HDAC6 |
| Gene Alias: | CPBHM|HD6|JM21|PPP1R90 |
| Gene Description: | histone deacetylase 6 |
| Gene Type: | protein-coding |
| CpG%: | 0.12 |
| GC%: | 0.701493 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
