Difference between revisions of "TSS:Hg 3033.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=AK055150:-32 ENST00000669294.1:-36 ENST00000419531.3:-39 NR_034014:-41 NR_034015:-41 NR_108106:-41 AK296298:-41 ENST00000663144.1:-59 ENST00000653297.1:-64 ENST00000649834.1:-64 |
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0.105 | |cpg_percent=0.105 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NR_034014 | |nearest_refseq=NR_034014 | ||
|nearest_unigene=Hs.680604 | |nearest_unigene=Hs.680604 | ||
| − | |num_trans= | + | |num_trans=10 |
|species=human | |species=human | ||
|start=58785191 | |start=58785191 | ||
|start_of_center_position=58785199 | |start_of_center_position=58785199 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name=AK055150 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_3033.1 | |tss_id=hg_3033.1 | ||
Revision as of 19:18, 17 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 58785199 |
|---|---|
| End of the center position in the TSS region: | 58785200 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | AK055150 |
|---|---|
| Distance: | -32 |
| Num_trans: | 10 |
| All_trans: | AK055150:-32 ENST00000669294.1:-36 ENST00000419531.3:-39 NR_034014:-41 NR_034015:-41 NR_108106:-41 AK296298:-41 ENST00000663144.1:-59 ENST00000653297.1:-64 ENST00000649834.1:-64 |
TATA-Box annotation
| Distance to TSS: | 48 |
|---|---|
| Nearest PromoterID: | NR_034015 |
| Entrez ID: | 100131060 |
| Nearest Unigene: | Hs.680604 |
| Nearest Refseq: | NR_034014 |
| Nearest Ensembl: | ENSG00000234807 |
| Gene Name: | long intergenic non-protein coding RNA 1135 |
| Gene Alias: | - |
| Gene Description: | long intergenic non-protein coding RNA 1135 |
| Gene Type: | ncRNA |
| CpG%: | 0.105 |
| GC%: | 0.616915 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
