Difference between revisions of "TSS:Hg 3094.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=ENST00000655770.1:76 | ||
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0.025 | |cpg_percent=0.025 | ||
| − | |distance= | + | |distance=76 |
|distance_to_tss=-23706 | |distance_to_tss=-23706 | ||
|end=61277230 | |end=61277230 | ||
| Line 10: | Line 11: | ||
|gene_alias=- | |gene_alias=- | ||
|gene_description=NFIA antisense RNA 1 | |gene_description=NFIA antisense RNA 1 | ||
| − | |gene_name=NFIA- | + | |gene_id=4774 |
| + | |gene_name=nuclear factor I A | ||
| + | |gene_source=HGNC:7784 | ||
| + | |gene_symbol=NFIA | ||
| + | |gene_synonyms=KIAA1439 NFI-L | ||
|gene_type=ncRNA | |gene_type=ncRNA | ||
| + | |hgnc_mgi_id=HGNC:7784 | ||
|nearest_ensembl=ENSG00000237853 | |nearest_ensembl=ENSG00000237853 | ||
|nearest_promoter_id=NR_104180 | |nearest_promoter_id=NR_104180 | ||
|nearest_refseq=NR_104180 | |nearest_refseq=NR_104180 | ||
|nearest_unigene=Hs.632410 | |nearest_unigene=Hs.632410 | ||
| − | |num_trans= | + | |num_trans=1 |
|species=human | |species=human | ||
|start=61277217 | |start=61277217 | ||
|start_of_center_position=61277223 | |start_of_center_position=61277223 | ||
|strand=+ | |strand=+ | ||
| − | |tata_box= | + | |tata_box=-29(GTGTATAAATAG,-,0.00) |
| − | |transcript_name= | + | |transcript_name=ENST00000655770.1 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_3094.1 | |tss_id=hg_3094.1 | ||
|tss_score=1 | |tss_score=1 | ||
| + | |uniprot_id=A0A590UJA3 | ||
}} | }} | ||
Revision as of 19:32, 17 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 61277223 |
|---|---|
| End of the center position in the TSS region: | 61277224 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000655770.1 |
|---|---|
| Distance: | 76 |
| Num_trans: | 1 |
| All_trans: | ENST00000655770.1:76 |
TATA-Box annotation
| Distance to TSS: | -23706 |
|---|---|
| Nearest PromoterID: | NR_104180 |
| Entrez ID: | 645030 |
| Nearest Unigene: | Hs.632410 |
| Nearest Refseq: | NR_104180 |
| Nearest Ensembl: | ENSG00000237853 |
| Gene Name: | nuclear factor I A |
| Gene Alias: | - |
| Gene Description: | NFIA antisense RNA 1 |
| Gene Type: | ncRNA |
| CpG%: | 0.025 |
| GC%: | 0.432836 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -29(GTGTATAAATAG,-,0.00) |
