Difference between revisions of "TSS:Hg 34830.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENST00000404891.1:0 | + | |all_trans=ENST00000404891.1:0 NR_161169:0 AK092442:0 ENST00000404327.3:-8 |
|chr=chr2 | |chr=chr2 | ||
|cpg_percent=0.03 | |cpg_percent=0.03 | ||
| Line 14: | Line 14: | ||
|gene_name=uncharacterized LOC100130449 | |gene_name=uncharacterized LOC100130449 | ||
|gene_source=EntrezGene:100130449 | |gene_source=EntrezGene:100130449 | ||
| − | |gene_symbol= | + | |gene_symbol=LOC100130449 |
|gene_synonyms= | |gene_synonyms= | ||
|gene_type=ncRNA | |gene_type=ncRNA | ||
|hgnc_mgi_id= | |hgnc_mgi_id= | ||
| − | |nearest_ensembl= | + | |nearest_ensembl= |
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NR_161169 |
|nearest_refseq=NR_024014 | |nearest_refseq=NR_024014 | ||
|nearest_unigene=Hs.655753 | |nearest_unigene=Hs.655753 | ||
| − | |num_trans= | + | |num_trans=4 |
|species=human | |species=human | ||
|start=240456689 | |start=240456689 | ||
|start_of_center_position=240456697 | |start_of_center_position=240456697 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000404891.1 | + | |transcript_name=ENST00000404891.1 NR_161169 AK092442 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_34830.1 | |tss_id=hg_34830.1 | ||
Revision as of 21:01, 17 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 240456697 |
|---|---|
| End of the center position in the TSS region: | 240456698 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000404891.1 NR_161169 AK092442 |
|---|---|
| Distance: | 0 |
| Num_trans: | 4 |
| All_trans: | ENST00000404891.1:0 NR_161169:0 AK092442:0 ENST00000404327.3:-8 |
TATA-Box annotation
| Distance to TSS: | 2 |
|---|---|
| Nearest PromoterID: | NR_161169 |
| Entrez ID: | 100130449 |
| Nearest Unigene: | Hs.655753 |
| Nearest Refseq: | NR_024014 |
| Nearest Ensembl: | |
| Gene Name: | uncharacterized LOC100130449 |
| Gene Alias: | - |
| Gene Description: | uncharacterized LOC100130449 |
| Gene Type: | ncRNA |
| CpG%: | 0.03 |
| GC%: | 0.656716 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
