Difference between revisions of "TSS:Hg 3730.1"
From referenceTSS
| Line 4: | Line 4: | ||
|LPHH1= | |LPHH1= | ||
|LPHN2= | |LPHN2= | ||
| + | |all_trans=ENST00000674208.1:-435 ENST00000674393.1:-446 ENST00000674333.1:-466 NM_001366006:-499 NM_001350698:-499 NM_001366002:-499 NM_001366009:-499 | ||
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0.055 | |cpg_percent=0.055 | ||
| − | |distance= | + | |distance=-435 |
| − | |distance_to_tss= | + | |distance_to_tss=518 |
|end=81801472 | |end=81801472 | ||
|end_of_center_position=81801453 | |end_of_center_position=81801453 | ||
|entrez_id=23266 | |entrez_id=23266 | ||
|gc_percent=0.60199 | |gc_percent=0.60199 | ||
| − | |gene_alias=CIRL2 | + | |gene_alias=CIRL2{{!}}CL2{{!}}LEC1{{!}}LPHH1{{!}}LPHN2 |
|gene_description=adhesion G protein-coupled receptor L2 | |gene_description=adhesion G protein-coupled receptor L2 | ||
| − | |gene_name=ADGRL2 | + | |gene_id=23266 |
| + | |gene_name=adhesion G protein-coupled receptor L2 | ||
| + | |gene_source=HGNC:18582 | ||
| + | |gene_symbol=ADGRL2 | ||
| + | |gene_synonyms=KIAA0786 LEC1 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:18582 | ||
|nearest_ensembl=ENSG00000117114 | |nearest_ensembl=ENSG00000117114 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001350698 |
|nearest_refseq=NM_012302 | |nearest_refseq=NM_012302 | ||
|nearest_unigene=Hs.24212 | |nearest_unigene=Hs.24212 | ||
| − | |num_trans= | + | |num_trans=7 |
|species=human | |species=human | ||
|start=81801432 | |start=81801432 | ||
|start_of_center_position=81801452 | |start_of_center_position=81801452 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name=ENST00000674208.1 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_3730.1 | |tss_id=hg_3730.1 | ||
|tss_score=1 | |tss_score=1 | ||
| + | |uniprot_id=A0A6I8PLG0 | ||
}} | }} | ||
Revision as of 21:58, 17 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 81801452 |
|---|---|
| End of the center position in the TSS region: | 81801453 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000674208.1 |
|---|---|
| Distance: | -435 |
| Num_trans: | 7 |
| All_trans: | ENST00000674208.1:-435 ENST00000674393.1:-446 ENST00000674333.1:-466 NM_001366006:-499 NM_001350698:-499 NM_001366002:-499 NM_001366009:-499 |
TATA-Box annotation
| Distance to TSS: | 518 |
|---|---|
| Nearest PromoterID: | NM_001350698 |
| Entrez ID: | 23266 |
| Nearest Unigene: | Hs.24212 |
| Nearest Refseq: | NM_012302 |
| Nearest Ensembl: | ENSG00000117114 |
| Gene Name: | adhesion G protein-coupled receptor L2 |
| Gene Alias: | CIRL2|CL2|LEC1|LPHH1|LPHN2 |
| Gene Description: | adhesion G protein-coupled receptor L2 |
| Gene Type: | protein-coding |
| CpG%: | 0.055 |
| GC%: | 0.60199 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
