Difference between revisions of "TSS:Hg 4821.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENST00000488733 | + | |all_trans=ENST00000488733.1:0 BC050359:0 BC003077:-2 D00099:17 X04297:17 ENST00000295598.10:-18 NM_000701:-18 AK314777:56 AK308418:136 LF352804:165 MA588381:165 EU176649:235 DQ891882:235 |
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0.14 | |cpg_percent=0.14 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=23 |
|end=116373272 | |end=116373272 | ||
|end_of_center_position=116373267 | |end_of_center_position=116373267 | ||
|entrez_id=476 | |entrez_id=476 | ||
|gc_percent=0.736318 | |gc_percent=0.736318 | ||
| − | |gene_alias= | + | |gene_alias=CMT2DD{{!}}HOMGSMR2 |
|gene_description=ATPase Na+/K+ transporting subunit alpha 1 | |gene_description=ATPase Na+/K+ transporting subunit alpha 1 | ||
|gene_id=476 | |gene_id=476 | ||
| Line 27: | Line 27: | ||
|start_of_center_position=116373266 | |start_of_center_position=116373266 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENST00000488733 | + | |transcript_name=ENST00000488733.1 BC050359 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_4821.1 | |tss_id=hg_4821.1 | ||
Revision as of 02:10, 18 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 116373266 |
|---|---|
| End of the center position in the TSS region: | 116373267 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000488733.1 BC050359 |
|---|---|
| Distance: | 0 |
| Num_trans: | 13 |
| All_trans: | ENST00000488733.1:0 BC050359:0 BC003077:-2 D00099:17 X04297:17 ENST00000295598.10:-18 NM_000701:-18 AK314777:56 AK308418:136 LF352804:165 MA588381:165 EU176649:235 DQ891882:235 |
TATA-Box annotation
| Distance to TSS: | 23 |
|---|---|
| Nearest PromoterID: | NM_000701 |
| Entrez ID: | 476 |
| Nearest Unigene: | Hs.371889 |
| Nearest Refseq: | NM_000701 |
| Nearest Ensembl: | ENSG00000163399 |
| Gene Name: | ATPase Na+/K+ transporting subunit alpha 1 |
| Gene Alias: | CMT2DD|HOMGSMR2 |
| Gene Description: | ATPase Na+/K+ transporting subunit alpha 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.14 |
| GC%: | 0.736318 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
