Difference between revisions of "TSS:Hg 49565.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENST00000505319.5:0 ENST00000610581.4:0 ENST00000339241.1:0 ENST00000515726.1:0 NM_001258038:0 | + | |all_trans=ENST00000505319.5:0 ENST00000651917.1:0 ENST00000610581.4:0 ENST00000339241.1:0 ENST00000515726.1:0 NM_001258038:0 NM_001375410:0 NM_199327:0 AY192146:0 |
|chr=chr4 | |chr=chr4 | ||
|cpg_percent=0.04 | |cpg_percent=0.04 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_005841 | |nearest_refseq=NM_005841 | ||
|nearest_unigene=Hs.744854 | |nearest_unigene=Hs.744854 | ||
| − | |num_trans= | + | |num_trans=9 |
|species=human | |species=human | ||
|start=123396785 | |start=123396785 | ||
|start_of_center_position=123396808 | |start_of_center_position=123396808 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENST00000505319.5 ENST00000610581.4 ENST00000339241.1 ENST00000515726.1 NM_001258038 NM_199327 | + | |transcript_name=ENST00000505319.5 ENST00000651917.1 ENST00000610581.4 ENST00000339241.1 ENST00000515726.1 NM_001258038 NM_001375410 NM_199327 AY192146 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_49565.1 | |tss_id=hg_49565.1 | ||
Revision as of 02:41, 18 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 123396808 |
|---|---|
| End of the center position in the TSS region: | 123396809 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000505319.5 ENST00000651917.1 ENST00000610581.4 ENST00000339241.1 ENST00000515726.1 NM_001258038 NM_001375410 NM_199327 AY192146 |
|---|---|
| Distance: | 0 |
| Num_trans: | 9 |
| All_trans: | ENST00000505319.5:0 ENST00000651917.1:0 ENST00000610581.4:0 ENST00000339241.1:0 ENST00000515726.1:0 NM_001258038:0 NM_001375410:0 NM_199327:0 AY192146:0 |
TATA-Box annotation
| Distance to TSS: | 14 |
|---|---|
| Nearest PromoterID: | NM_001258038 |
| Entrez ID: | 10252 |
| Nearest Unigene: | Hs.744854 |
| Nearest Refseq: | NM_005841 |
| Nearest Ensembl: | ENSG00000164056 |
| Gene Name: | sprouty RTK signaling antagonist 1 |
| Gene Alias: | hSPRY1 |
| Gene Description: | sprouty RTK signaling antagonist 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.04 |
| GC%: | 0.542289 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
