Difference between revisions of "TSS:Hg 51067.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=AK091779:146 BC044945:173 ENST00000505653 | + | |all_trans=AK091779:146 BC044945:173 ENST00000505653.1:205 BC104228:205 BC104229:205 BC112991:205 BC112992:205 |
|chr=chr4 | |chr=chr4 | ||
|cpg_percent=0.05 | |cpg_percent=0.05 | ||
| Line 7: | Line 7: | ||
|end=1201591 | |end=1201591 | ||
|end_of_center_position=1201577 | |end_of_center_position=1201577 | ||
| − | |entrez_id= | + | |entrez_id=10417 |
|gc_percent=0.562189 | |gc_percent=0.562189 | ||
| − | |gene_alias=- | + | |gene_alias=DIL-1{{!}}DIL1{{!}}M-SPONDIN{{!}}MINDIN |
| − | |gene_description= | + | |gene_description=spondin 2 |
|gene_id=100130872 | |gene_id=100130872 | ||
|gene_name=uncharacterized LOC100130872 | |gene_name=uncharacterized LOC100130872 | ||
| Line 16: | Line 16: | ||
|gene_symbol=LOC100130872 | |gene_symbol=LOC100130872 | ||
|gene_synonyms= | |gene_synonyms= | ||
| − | |gene_type= | + | |gene_type=protein-coding |
|hgnc_mgi_id= | |hgnc_mgi_id= | ||
| − | |nearest_ensembl= | + | |nearest_ensembl=ENSG00000159674 |
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001199021 |
| − | |nearest_refseq= | + | |nearest_refseq=NM_012445 |
|nearest_unigene=Hs.302963 | |nearest_unigene=Hs.302963 | ||
| − | |num_trans= | + | |num_trans=7 |
|species=human | |species=human | ||
|start=1201561 | |start=1201561 | ||
Revision as of 03:16, 18 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 1201576 |
|---|---|
| End of the center position in the TSS region: | 1201577 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | AK091779 |
|---|---|
| Distance: | 146 |
| Num_trans: | 7 |
| All_trans: | AK091779:146 BC044945:173 ENST00000505653.1:205 BC104228:205 BC104229:205 BC112991:205 BC112992:205 |
TATA-Box annotation
| Distance to TSS: | 7386 |
|---|---|
| Nearest PromoterID: | NM_001199021 |
| Entrez ID: | 10417 |
| Nearest Unigene: | Hs.302963 |
| Nearest Refseq: | NM_012445 |
| Nearest Ensembl: | ENSG00000159674 |
| Gene Name: | uncharacterized LOC100130872 |
| Gene Alias: | DIL-1|DIL1|M-SPONDIN|MINDIN |
| Gene Description: | spondin 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.05 |
| GC%: | 0.562189 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
