Difference between revisions of "TSS:Hg 60777.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENST00000320895. | + | |all_trans=ENST00000320895.10:0 NM_030782:0 ENST00000630539.1:198 BC025305:198 AK027306:201 DQ892147:242 DQ895343:242 AB045223:258 |
|chr=chr5 | |chr=chr5 | ||
|cpg_percent=0.195 | |cpg_percent=0.195 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=4 |
|end=1345105 | |end=1345105 | ||
|end_of_center_position=1345095 | |end_of_center_position=1345095 | ||
| Line 12: | Line 12: | ||
|gene_description=CLPTM1 like | |gene_description=CLPTM1 like | ||
|gene_id=81037 | |gene_id=81037 | ||
| − | |gene_name=CLPTM1 | + | |gene_name=CLPTM1 like |
|gene_source=HGNC:24308 | |gene_source=HGNC:24308 | ||
|gene_symbol=CLPTM1L | |gene_symbol=CLPTM1L | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_030782 | |nearest_refseq=NM_030782 | ||
|nearest_unigene=Hs.444673 | |nearest_unigene=Hs.444673 | ||
| − | |num_trans= | + | |num_trans=8 |
|species=human | |species=human | ||
|start=1345084 | |start=1345084 | ||
|start_of_center_position=1345094 | |start_of_center_position=1345094 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000320895. | + | |transcript_name=ENST00000320895.10 NM_030782 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_60777.1 | |tss_id=hg_60777.1 | ||
Revision as of 07:03, 18 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 1345094 |
|---|---|
| End of the center position in the TSS region: | 1345095 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000320895.10 NM_030782 |
|---|---|
| Distance: | 0 |
| Num_trans: | 8 |
| All_trans: | ENST00000320895.10:0 NM_030782:0 ENST00000630539.1:198 BC025305:198 AK027306:201 DQ892147:242 DQ895343:242 AB045223:258 |
TATA-Box annotation
| Distance to TSS: | 4 |
|---|---|
| Nearest PromoterID: | NM_030782 |
| Entrez ID: | 81037 |
| Nearest Unigene: | Hs.444673 |
| Nearest Refseq: | NM_030782 |
| Nearest Ensembl: | ENSG00000049656 |
| Gene Name: | CLPTM1 like |
| Gene Alias: | CRR9 |
| Gene Description: | CLPTM1 like |
| Gene Type: | protein-coding |
| CpG%: | 0.195 |
| GC%: | 0.800995 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
