Difference between revisions of "TSS:Hg 82829.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENST00000405192.6:0 ENST00000433547.1:0 | + | |all_trans=ENST00000430479.6:0 ENST00000405192.6:0 ENST00000433547.1:0 NM_004956:0 NM_001370556:0 AB209202:0 BC098403:-5 AK312863:-13 ENST00000483075.1:20 BC106762:247 BC106763:247 ENST00000405218.6:-261 NM_001163147:-331 |
|chr=chr7 | |chr=chr7 | ||
|cpg_percent=0.04 | |cpg_percent=0.04 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=-6 |
|end=13989686 | |end=13989686 | ||
|end_of_center_position=13989673 | |end_of_center_position=13989673 | ||
| Line 12: | Line 12: | ||
|gene_description=ETS variant 1 | |gene_description=ETS variant 1 | ||
|gene_id=2115 | |gene_id=2115 | ||
| − | |gene_name=ETS variant 1 | + | |gene_name=ETS variant transcription factor 1 |
|gene_source=HGNC:3490 | |gene_source=HGNC:3490 | ||
|gene_symbol=ETV1 | |gene_symbol=ETV1 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_004956 | |nearest_refseq=NM_004956 | ||
|nearest_unigene=Hs.22634 | |nearest_unigene=Hs.22634 | ||
| − | |num_trans= | + | |num_trans=13 |
|species=human | |species=human | ||
|start=13989658 | |start=13989658 | ||
|start_of_center_position=13989672 | |start_of_center_position=13989672 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000405192.6 ENST00000433547.1 | + | |transcript_name=ENST00000430479.6 ENST00000405192.6 ENST00000433547.1 NM_004956 NM_001370556 AB209202 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_82829.1 | |tss_id=hg_82829.1 | ||
Revision as of 15:37, 18 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 13989672 |
|---|---|
| End of the center position in the TSS region: | 13989673 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000430479.6 ENST00000405192.6 ENST00000433547.1 NM_004956 NM_001370556 AB209202 |
|---|---|
| Distance: | 0 |
| Num_trans: | 13 |
| All_trans: | ENST00000430479.6:0 ENST00000405192.6:0 ENST00000433547.1:0 NM_004956:0 NM_001370556:0 AB209202:0 BC098403:-5 AK312863:-13 ENST00000483075.1:20 BC106762:247 BC106763:247 ENST00000405218.6:-261 NM_001163147:-331 |
TATA-Box annotation
| Distance to TSS: | -6 |
|---|---|
| Nearest PromoterID: | NM_004956 |
| Entrez ID: | 2115 |
| Nearest Unigene: | Hs.22634 |
| Nearest Refseq: | NM_004956 |
| Nearest Ensembl: | ENSG00000006468 |
| Gene Name: | ETS variant transcription factor 1 |
| Gene Alias: | ER81 |
| Gene Description: | ETS variant 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.04 |
| GC%: | 0.492537 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
