Difference between revisions of "TSS:Hg 87736.1"
From referenceTSS
| Line 4: | Line 4: | ||
|PCP2= | |PCP2= | ||
|TLD= | |TLD= | ||
| − | |all_trans= | + | |all_trans=ENST00000306349.13:0 ENST00000306385.10:0 ENST00000471755.5:0 ENST00000483364.5:0 ENST00000521385.5:0 NM_001199:0 NR_033403:0 NM_006129:0 NR_033404:0 M22488:0 Y08723:0 Y08724:0 Y08725:0 AB527418:0 KJ896503:0 U50330:0 ENST00000518656.5:-24 BC101763:-24 BC101765:-24 BC143338:-24 ENST00000520982.5:-35 ENST00000520626.6:-35 BC136679:-35 BC144365:-35 BC144366:-35 AK291620:-72 BC142953:-83 ENST00000518913.5:-107 BC002593:-107 BC009305:-107 BC032105:-107 BC044626:-107 ENST00000520970.5:-172 AB209590:-172 ENST00000397814.7:-219 ENST00000354870.5:-219 |
|chr=chr8 | |chr=chr8 | ||
|cpg_percent=0.145 | |cpg_percent=0.145 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=12 |
|end=22165410 | |end=22165410 | ||
|end_of_center_position=22165385 | |end_of_center_position=22165385 | ||
|entrez_id=649 | |entrez_id=649 | ||
|gc_percent=0.781095 | |gc_percent=0.781095 | ||
| − | |gene_alias=OI13 | + | |gene_alias=OI13{{!}}PCOLC{{!}}PCP{{!}}PCP2{{!}}TLD |
|gene_description=bone morphogenetic protein 1 | |gene_description=bone morphogenetic protein 1 | ||
|gene_id=649 | |gene_id=649 | ||
| Line 19: | Line 19: | ||
|gene_source=HGNC:1067 | |gene_source=HGNC:1067 | ||
|gene_symbol=BMP1 | |gene_symbol=BMP1 | ||
| − | |gene_synonyms= | + | |gene_synonyms=BMP-1 |
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hgnc_mgi_id=HGNC:1067 | |hgnc_mgi_id=HGNC:1067 | ||
| Line 26: | Line 26: | ||
|nearest_refseq=NM_001199 | |nearest_refseq=NM_001199 | ||
|nearest_unigene=Hs.1274 | |nearest_unigene=Hs.1274 | ||
| − | |num_trans= | + | |num_trans=36 |
|species=human | |species=human | ||
|start=22165358 | |start=22165358 | ||
|start_of_center_position=22165384 | |start_of_center_position=22165384 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name=ENST00000306349.13 ENST00000306385.10 ENST00000471755.5 ENST00000483364.5 ENST00000521385.5 NM_001199 NR_033403 NM_006129 NR_033404 M22488 Y08723 Y08724 Y08725 AB527418 KJ896503 U50330 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_87736.1 | |tss_id=hg_87736.1 | ||
Revision as of 17:31, 18 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 22165384 |
|---|---|
| End of the center position in the TSS region: | 22165385 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000306349.13 ENST00000306385.10 ENST00000471755.5 ENST00000483364.5 ENST00000521385.5 NM_001199 NR_033403 NM_006129 NR_033404 M22488 Y08723 Y08724 Y08725 AB527418 KJ896503 U50330 |
|---|---|
| Distance: | 0 |
| Num_trans: | 36 |
| All_trans: | ENST00000306349.13:0 ENST00000306385.10:0 ENST00000471755.5:0 ENST00000483364.5:0 ENST00000521385.5:0 NM_001199:0 NR_033403:0 NM_006129:0 NR_033404:0 M22488:0 Y08723:0 Y08724:0 Y08725:0 AB527418:0 KJ896503:0 U50330:0 ENST00000518656.5:-24 BC101763:-24 BC101765:-24 BC143338:-24 ENST00000520982.5:-35 ENST00000520626.6:-35 BC136679:-35 BC144365:-35 BC144366:-35 AK291620:-72 BC142953:-83 ENST00000518913.5:-107 BC002593:-107 BC009305:-107 BC032105:-107 BC044626:-107 ENST00000520970.5:-172 AB209590:-172 ENST00000397814.7:-219 ENST00000354870.5:-219 |
TATA-Box annotation
| Distance to TSS: | 12 |
|---|---|
| Nearest PromoterID: | NR_033403 |
| Entrez ID: | 649 |
| Nearest Unigene: | Hs.1274 |
| Nearest Refseq: | NM_001199 |
| Nearest Ensembl: | ENSG00000168487 |
| Gene Name: | bone morphogenetic protein 1 |
| Gene Alias: | OI13|PCOLC|PCP|PCP2|TLD |
| Gene Description: | bone morphogenetic protein 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.145 |
| GC%: | 0.781095 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
