Difference between revisions of "TSS:Hg 88783.1"
From referenceTSS
| Line 4: | Line 4: | ||
|NKGCD= | |NKGCD= | ||
|P1-CDC21= | |P1-CDC21= | ||
| + | |all_trans=ENST00000648533.1:-444 | ||
|chr=chr8 | |chr=chr8 | ||
|cpg_percent=0.03 | |cpg_percent=0.03 | ||
| − | |distance= | + | |distance=-444 |
| − | |distance_to_tss= | + | |distance_to_tss=16798 |
|end=47977742 | |end=47977742 | ||
|end_of_center_position=47977740 | |end_of_center_position=47977740 | ||
|entrez_id=4173 | |entrez_id=4173 | ||
|gc_percent=0.467662 | |gc_percent=0.467662 | ||
| − | |gene_alias=CDC21 | + | |gene_alias=CDC21{{!}}CDC54{{!}}IMD54{{!}}NKCD{{!}}NKGCD{{!}}P1-CDC21{{!}}hCdc21 |
|gene_description=minichromosome maintenance complex component 4 | |gene_description=minichromosome maintenance complex component 4 | ||
| − | |gene_name=MCM4 | + | |gene_id=4173 |
| + | |gene_name=minichromosome maintenance complex component 4 | ||
| + | |gene_source=HGNC:6947 | ||
| + | |gene_symbol=MCM4 | ||
| + | |gene_synonyms=CDC54 MGC33310 P1-Cdc21 hCdc21 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hCdc21= | |hCdc21= | ||
| + | |hgnc_mgi_id=HGNC:6947 | ||
|nearest_ensembl=ENSG00000104738 | |nearest_ensembl=ENSG00000104738 | ||
|nearest_promoter_id=NM_005914 | |nearest_promoter_id=NM_005914 | ||
|nearest_refseq=NM_005914 | |nearest_refseq=NM_005914 | ||
|nearest_unigene=Hs.460184 | |nearest_unigene=Hs.460184 | ||
| − | |num_trans= | + | |num_trans=1 |
|species=human | |species=human | ||
|start=47977736 | |start=47977736 | ||
|start_of_center_position=47977739 | |start_of_center_position=47977739 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name=ENST00000648533.1 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_88783.1 | |tss_id=hg_88783.1 | ||
|tss_score=1 | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Revision as of 17:56, 18 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 47977739 |
|---|---|
| End of the center position in the TSS region: | 47977740 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000648533.1 |
|---|---|
| Distance: | -444 |
| Num_trans: | 1 |
| All_trans: | ENST00000648533.1:-444 |
TATA-Box annotation
| Distance to TSS: | 16798 |
|---|---|
| Nearest PromoterID: | NM_005914 |
| Entrez ID: | 4173 |
| Nearest Unigene: | Hs.460184 |
| Nearest Refseq: | NM_005914 |
| Nearest Ensembl: | ENSG00000104738 |
| Gene Name: | minichromosome maintenance complex component 4 |
| Gene Alias: | CDC21|CDC54|IMD54|NKCD|NKGCD|P1-CDC21|hCdc21 |
| Gene Description: | minichromosome maintenance complex component 4 |
| Gene Type: | protein-coding |
| CpG%: | 0.03 |
| GC%: | 0.467662 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
