Difference between revisions of "TSS:Hg 94115.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENST00000524245.5 | + | |all_trans=ENST00000524245.5:86 ENST00000520271.5:-390 ENST00000522940.5:-391 X13238:-430 ENST00000523016.1:-448 ENST00000517682.6:-449 ENST00000297564.6:-452 ENST00000518171.5:-465 ENST00000522934.5:-474 AK311791:-474 ENST00000520517.5:-475 ENST00000520468.7:-475 NM_004374:-475 |
|chr=chr8 | |chr=chr8 | ||
|cpg_percent=0.055 | |cpg_percent=0.055 | ||
|distance=86 | |distance=86 | ||
| − | |distance_to_tss= | + | |distance_to_tss=481 |
|end=99893232 | |end=99893232 | ||
|end_of_center_position=99893227 | |end_of_center_position=99893227 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_004374 | |nearest_refseq=NM_004374 | ||
|nearest_unigene=Hs.351875 | |nearest_unigene=Hs.351875 | ||
| − | |num_trans= | + | |num_trans=13 |
|species=human | |species=human | ||
|start=99893220 | |start=99893220 | ||
|start_of_center_position=99893226 | |start_of_center_position=99893226 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000524245.5 | + | |transcript_name=ENST00000524245.5 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_94115.1 | |tss_id=hg_94115.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id=A0A024R9B7 | + | |uniprot_id=A0A024R9B7 |
}} | }} | ||
Revision as of 20:00, 18 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 99893226 |
|---|---|
| End of the center position in the TSS region: | 99893227 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000524245.5 |
|---|---|
| Distance: | 86 |
| Num_trans: | 13 |
| All_trans: | ENST00000524245.5:86 ENST00000520271.5:-390 ENST00000522940.5:-391 X13238:-430 ENST00000523016.1:-448 ENST00000517682.6:-449 ENST00000297564.6:-452 ENST00000518171.5:-465 ENST00000522934.5:-474 AK311791:-474 ENST00000520517.5:-475 ENST00000520468.7:-475 NM_004374:-475 |
TATA-Box annotation
| Distance to TSS: | 481 |
|---|---|
| Nearest PromoterID: | NM_004374 |
| Entrez ID: | 1345 |
| Nearest Unigene: | Hs.351875 |
| Nearest Refseq: | NM_004374 |
| Nearest Ensembl: | ENSG00000164919 |
| Gene Name: | cytochrome c oxidase subunit 6C |
| Gene Alias: | - |
| Gene Description: | cytochrome c oxidase subunit 6C |
| Gene Type: | protein-coding |
| CpG%: | 0.055 |
| GC%: | 0.572139 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
