Difference between revisions of "TSS:Hg 94708.1"
From referenceTSS
| Line 2: | Line 2: | ||
|HCCC11_v1= | |HCCC11_v1= | ||
|HCCC11_v2= | |HCCC11_v2= | ||
| − | |all_trans=ENST00000520576.5:-381 ENST00000517519.5:-381 ENST00000523330.1:-381 NR_024479 | + | |all_trans=ENST00000661117.1:0 ENST00000654317.1:0 ENST00000520576.5:-381 ENST00000517519.5:-381 ENST00000523330.1:-381 NR_024479:-381 AY211906:-381 AY211907:-381 AY211908:-381 AY225521:-381 |
|chr=chr8 | |chr=chr8 | ||
|cpg_percent=0.03 | |cpg_percent=0.03 | ||
| − | |distance= | + | |distance=0 |
|distance_to_tss=391 | |distance_to_tss=391 | ||
|end=123202362 | |end=123202362 | ||
| Line 11: | Line 11: | ||
|entrez_id=100131726 | |entrez_id=100131726 | ||
|gc_percent=0.537313 | |gc_percent=0.537313 | ||
| − | |gene_alias=HCCC11 | + | |gene_alias=HCCC11{{!}}HCCC11_v1{{!}}HCCC11_v2 |
|gene_description=FAM83A antisense RNA 1 | |gene_description=FAM83A antisense RNA 1 | ||
|gene_id=100131726 | |gene_id=100131726 | ||
| Line 24: | Line 24: | ||
|nearest_refseq=NR_024479 | |nearest_refseq=NR_024479 | ||
|nearest_unigene=Hs.660862 | |nearest_unigene=Hs.660862 | ||
| − | |num_trans= | + | |num_trans=10 |
|species=human | |species=human | ||
|start=123202341 | |start=123202341 | ||
|start_of_center_position=123202351 | |start_of_center_position=123202351 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=ENST00000661117.1 ENST00000654317.1 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_94708.1 | |tss_id=hg_94708.1 | ||
Revision as of 20:13, 18 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 123202351 |
|---|---|
| End of the center position in the TSS region: | 123202352 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000661117.1 ENST00000654317.1 |
|---|---|
| Distance: | 0 |
| Num_trans: | 10 |
| All_trans: | ENST00000661117.1:0 ENST00000654317.1:0 ENST00000520576.5:-381 ENST00000517519.5:-381 ENST00000523330.1:-381 NR_024479:-381 AY211906:-381 AY211907:-381 AY211908:-381 AY225521:-381 |
TATA-Box annotation
| Distance to TSS: | 391 |
|---|---|
| Nearest PromoterID: | NR_024479 |
| Entrez ID: | 100131726 |
| Nearest Unigene: | Hs.660862 |
| Nearest Refseq: | NR_024479 |
| Nearest Ensembl: | ENSG00000204949 |
| Gene Name: | FAM83A antisense RNA 1 |
| Gene Alias: | HCCC11|HCCC11_v1|HCCC11_v2 |
| Gene Description: | FAM83A antisense RNA 1 |
| Gene Type: | ncRNA |
| CpG%: | 0.03 |
| GC%: | 0.537313 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
