Difference between revisions of "TSS:Hg 9989.1"
From referenceTSS
| Line 3: | Line 3: | ||
|HBP15/L22= | |HBP15/L22= | ||
|L22= | |L22= | ||
| − | |all_trans=ENST00000480661 | + | |all_trans=ENST00000480661.1:0 ENST00000465387.5:7 CR456873:-10 KJ892031:-11 BC046108:-13 X59357:-13 BC058887:-14 AK097075:-30 D17652:-30 AK311749:-30 ENST00000234875.9:-32 NM_000983:-32 BC066314:-32 BC035566:-45 |
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0.105 | |cpg_percent=0.105 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=34 |
|end=6199563 | |end=6199563 | ||
|end_of_center_position=6199562 | |end_of_center_position=6199562 | ||
|entrez_id=6146 | |entrez_id=6146 | ||
|gc_percent=0.696517 | |gc_percent=0.696517 | ||
| − | |gene_alias=EAP | + | |gene_alias=EAP{{!}}HBP15{{!}}HBP15/L22{{!}}L22 |
|gene_description=ribosomal protein L22 | |gene_description=ribosomal protein L22 | ||
|gene_id=6146 | |gene_id=6146 | ||
| Line 25: | Line 25: | ||
|nearest_refseq=NM_000983 | |nearest_refseq=NM_000983 | ||
|nearest_unigene=Hs.515329 | |nearest_unigene=Hs.515329 | ||
| − | |num_trans= | + | |num_trans=14 |
|species=human | |species=human | ||
|start=6199559 | |start=6199559 | ||
|start_of_center_position=6199561 | |start_of_center_position=6199561 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000480661 | + | |transcript_name=ENST00000480661.1 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_9989.1 | |tss_id=hg_9989.1 | ||
Revision as of 22:14, 18 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 6199561 |
|---|---|
| End of the center position in the TSS region: | 6199562 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000480661.1 |
|---|---|
| Distance: | 0 |
| Num_trans: | 14 |
| All_trans: | ENST00000480661.1:0 ENST00000465387.5:7 CR456873:-10 KJ892031:-11 BC046108:-13 X59357:-13 BC058887:-14 AK097075:-30 D17652:-30 AK311749:-30 ENST00000234875.9:-32 NM_000983:-32 BC066314:-32 BC035566:-45 |
TATA-Box annotation
| Distance to TSS: | 34 |
|---|---|
| Nearest PromoterID: | NM_000983 |
| Entrez ID: | 6146 |
| Nearest Unigene: | Hs.515329 |
| Nearest Refseq: | NM_000983 |
| Nearest Ensembl: | ENSG00000116251 |
| Gene Name: | ribosomal protein L22 |
| Gene Alias: | EAP|HBP15|HBP15/L22|L22 |
| Gene Description: | ribosomal protein L22 |
| Gene Type: | protein-coding |
| CpG%: | 0.105 |
| GC%: | 0.696517 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
