Difference between revisions of "TSS:Hg 99969.1"
From referenceTSS
| Line 7: | Line 7: | ||
|NFIB2= | |NFIB2= | ||
|NFIB3= | |NFIB3= | ||
| − | |all_trans=AK129782:-318 | + | |all_trans=LF355238:0 MA590815:0 LF355239:-294 MA590816:-294 AK129782:-318 LF355240:-436 MA590817:-436 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.005 | |cpg_percent=0.005 | ||
| − | |distance= | + | |distance=0 |
|distance_to_tss=98033 | |distance_to_tss=98033 | ||
|end=14082776 | |end=14082776 | ||
| Line 16: | Line 16: | ||
|entrez_id=4781 | |entrez_id=4781 | ||
|gc_percent=0.313433 | |gc_percent=0.313433 | ||
| − | |gene_alias=CTF | + | |gene_alias=CTF{{!}}HMGIC/NFIB{{!}}MACID{{!}}NF-I/B{{!}}NF1-B{{!}}NFI-B{{!}}NFI-RED{{!}}NFIB2{{!}}NFIB3 |
|gene_description=nuclear factor I B | |gene_description=nuclear factor I B | ||
|gene_id=4781 | |gene_id=4781 | ||
| − | |gene_name= | + | |gene_name=NFIB |
|gene_source=HGNC:7785 | |gene_source=HGNC:7785 | ||
|gene_symbol=NFIB | |gene_symbol=NFIB | ||
| Line 29: | Line 29: | ||
|nearest_refseq=NM_005596 | |nearest_refseq=NM_005596 | ||
|nearest_unigene=Hs.644095 | |nearest_unigene=Hs.644095 | ||
| − | |num_trans= | + | |num_trans=7 |
|species=human | |species=human | ||
|start=14082761 | |start=14082761 | ||
|start_of_center_position=14082768 | |start_of_center_position=14082768 | ||
|strand=- | |strand=- | ||
| − | |tata_box= | + | |tata_box=8(GGCTTTTTATGC,-,0.00) |
| − | |transcript_name= | + | |transcript_name=LF355238 MA590815 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_99969.1 | |tss_id=hg_99969.1 | ||
Latest revision as of 22:16, 18 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 14082768 |
|---|---|
| End of the center position in the TSS region: | 14082769 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | LF355238 MA590815 |
|---|---|
| Distance: | 0 |
| Num_trans: | 7 |
| All_trans: | LF355238:0 MA590815:0 LF355239:-294 MA590816:-294 AK129782:-318 LF355240:-436 MA590817:-436 |
TATA-Box annotation
| Distance to TSS: | 98033 |
|---|---|
| Nearest PromoterID: | NM_001282787 |
| Entrez ID: | 4781 |
| Nearest Unigene: | Hs.644095 |
| Nearest Refseq: | NM_005596 |
| Nearest Ensembl: | ENSG00000147862 |
| Gene Name: | NFIB |
| Gene Alias: | CTF|HMGIC/NFIB|MACID|NF-I/B|NF1-B|NFI-B|NFI-RED|NFIB2|NFIB3 |
| Gene Description: | nuclear factor I B |
| Gene Type: | protein-coding |
| CpG%: | 0.005 |
| GC%: | 0.313433 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | 8(GGCTTTTTATGC,-,0.00) |
