Difference between revisions of "TSS:Hg 99992.1"
From referenceTSS
| Line 7: | Line 7: | ||
|NFIB2= | |NFIB2= | ||
|NFIB3= | |NFIB3= | ||
| − | |all_trans=ENST00000493697.1:0 | + | |all_trans=ENST00000493697.1:0 NM_001369465:0 NM_001369476:0 NM_001369474:0 NM_001369467:0 ENST00000636057.1:-31 ENST00000637640.1:78 LF355357:346 MA590934:346 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.02 | |cpg_percent=0.02 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=11 |
|end=14308042 | |end=14308042 | ||
|end_of_center_position=14308024 | |end_of_center_position=14308024 | ||
|entrez_id=4781 | |entrez_id=4781 | ||
|gc_percent=0.457711 | |gc_percent=0.457711 | ||
| − | |gene_alias=CTF | + | |gene_alias=CTF{{!}}HMGIC/NFIB{{!}}MACID{{!}}NF-I/B{{!}}NF1-B{{!}}NFI-B{{!}}NFI-RED{{!}}NFIB2{{!}}NFIB3 |
|gene_description=nuclear factor I B | |gene_description=nuclear factor I B | ||
|gene_id=4781 | |gene_id=4781 | ||
| − | |gene_name=nuclear factor I | + | |gene_name=nuclear factor I B |
|gene_source=HGNC:7785 | |gene_source=HGNC:7785 | ||
|gene_symbol=NFIB | |gene_symbol=NFIB | ||
| Line 26: | Line 26: | ||
|hgnc_mgi_id=HGNC:7785 | |hgnc_mgi_id=HGNC:7785 | ||
|nearest_ensembl=ENSG00000147862 | |nearest_ensembl=ENSG00000147862 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001369474 |
|nearest_refseq=NM_005596 | |nearest_refseq=NM_005596 | ||
|nearest_unigene=Hs.644095 | |nearest_unigene=Hs.644095 | ||
| − | |num_trans= | + | |num_trans=9 |
|species=human | |species=human | ||
|start=14308005 | |start=14308005 | ||
|start_of_center_position=14308023 | |start_of_center_position=14308023 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000493697.1 | + | |transcript_name=ENST00000493697.1 NM_001369465 NM_001369476 NM_001369474 NM_001369467 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_99992.1 | |tss_id=hg_99992.1 | ||
Revision as of 22:17, 18 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 14308023 |
|---|---|
| End of the center position in the TSS region: | 14308024 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000493697.1 NM_001369465 NM_001369476 NM_001369474 NM_001369467 |
|---|---|
| Distance: | 0 |
| Num_trans: | 9 |
| All_trans: | ENST00000493697.1:0 NM_001369465:0 NM_001369476:0 NM_001369474:0 NM_001369467:0 ENST00000636057.1:-31 ENST00000637640.1:78 LF355357:346 MA590934:346 |
TATA-Box annotation
| Distance to TSS: | 11 |
|---|---|
| Nearest PromoterID: | NM_001369474 |
| Entrez ID: | 4781 |
| Nearest Unigene: | Hs.644095 |
| Nearest Refseq: | NM_005596 |
| Nearest Ensembl: | ENSG00000147862 |
| Gene Name: | nuclear factor I B |
| Gene Alias: | CTF|HMGIC/NFIB|MACID|NF-I/B|NF1-B|NFI-B|NFI-RED|NFIB2|NFIB3 |
| Gene Description: | nuclear factor I B |
| Gene Type: | protein-coding |
| CpG%: | 0.02 |
| GC%: | 0.457711 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
