Difference between revisions of "TSS:Mm 100063.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=BC145613:0 BC150803:0 AK043266:-10 AB087505:-10 BC165953:32 ENSMUST00000019006.4:-55 NM_027132:-55 | + | |all_trans=BC145613:0 BC150803:0 AK043266:-10 AB087505:-10 BC165953:32 ENSMUST00000019006.4:-55 NM_027132:-55 ENSMUST00000106543.7:-58 NM_001347647:-58 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.08 | |cpg_percent=0.08 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_027132 | |nearest_refseq=NM_027132 | ||
|nearest_unigene=Mm.101844 | |nearest_unigene=Mm.101844 | ||
| − | |num_trans= | + | |num_trans=9 |
|species=mouse | |species=mouse | ||
|start=115334788 | |start=115334788 | ||
Revision as of 16:08, 19 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 115334818 |
|---|---|
| End of the center position in the TSS region: | 115334819 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | BC145613 BC150803 |
|---|---|
| Distance: | 0 |
| Num_trans: | 9 |
| All_trans: | BC145613:0 BC150803:0 AK043266:-10 AB087505:-10 BC165953:32 ENSMUST00000019006.4:-55 NM_027132:-55 ENSMUST00000106543.7:-58 NM_001347647:-58 |
TATA-Box annotation
| Distance to TSS: | 85 |
|---|---|
| Nearest PromoterID: | NM_027132 |
| Entrez ID: | 69602 |
| Nearest Unigene: | Mm.101844 |
| Nearest Refseq: | NM_027132 |
| Nearest Ensembl: | ENSMUSG00000018862 |
| Gene Name: | otopetrin 3 |
| Gene Alias: | 2310011E08Rik |
| Gene Description: | otopetrin 3 |
| Gene Type: | protein-coding |
| CpG%: | 0.08 |
| GC%: | 0.621891 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
