Difference between revisions of "TSS:Mm 100077.1"
From referenceTSS
| Line 3: | Line 3: | ||
|MCT 6= | |MCT 6= | ||
|MCT5= | |MCT5= | ||
| − | |all_trans=ENSMUST00000133636.7:47 | + | |all_trans=ENSMUST00000133636.7:47 NM_001359609:47 BC052932:47 BC053982:47 ENSMUST00000140567.1:62 ENSMUST00000139318.7:65 ENSMUST00000146500.1:71 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.03 | |cpg_percent=0.03 | ||
|distance=47 | |distance=47 | ||
| − | |distance_to_tss= | + | |distance_to_tss=-51 |
|end=115463753 | |end=115463753 | ||
|end_of_center_position=115463749 | |end_of_center_position=115463749 | ||
|entrez_id=217316 | |entrez_id=217316 | ||
|gc_percent=0.532338 | |gc_percent=0.532338 | ||
| − | |gene_alias=A130015N09Rik | + | |gene_alias=A130015N09Rik{{!}}MCT 5{{!}}MCT 6{{!}}MCT5 |
| − | |gene_description= | + | |gene_description=solute carrier family 16 (monocarboxylic acid transporters), member 5 |
|gene_id=217316 | |gene_id=217316 | ||
| − | |gene_name= | + | |gene_name=solute carrier family 16 (monocarboxylic acid transporters), member 5 |
|gene_source=MGI:2443515 | |gene_source=MGI:2443515 | ||
|gene_symbol=Slc16a5 | |gene_symbol=Slc16a5 | ||
| Line 22: | Line 22: | ||
|hgnc_mgi_id=MGI:2443515 | |hgnc_mgi_id=MGI:2443515 | ||
|nearest_ensembl=ENSMUSG00000045775 | |nearest_ensembl=ENSMUSG00000045775 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001359609 |
|nearest_refseq=NM_001080934 | |nearest_refseq=NM_001080934 | ||
|nearest_unigene=Mm.25773 | |nearest_unigene=Mm.25773 | ||
| Line 30: | Line 30: | ||
|start_of_center_position=115463748 | |start_of_center_position=115463748 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENSMUST00000133636.7 | + | |transcript_name=ENSMUST00000133636.7 NM_001359609 BC052932 BC053982 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=mm_100077.1 | |tss_id=mm_100077.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id= |
}} | }} | ||
Revision as of 16:08, 19 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 115463748 |
|---|---|
| End of the center position in the TSS region: | 115463749 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENSMUST00000133636.7 NM_001359609 BC052932 BC053982 |
|---|---|
| Distance: | 47 |
| Num_trans: | 7 |
| All_trans: | ENSMUST00000133636.7:47 NM_001359609:47 BC052932:47 BC053982:47 ENSMUST00000140567.1:62 ENSMUST00000139318.7:65 ENSMUST00000146500.1:71 |
TATA-Box annotation
| Distance to TSS: | -51 |
|---|---|
| Nearest PromoterID: | NM_001359609 |
| Entrez ID: | 217316 |
| Nearest Unigene: | Mm.25773 |
| Nearest Refseq: | NM_001080934 |
| Nearest Ensembl: | ENSMUSG00000045775 |
| Gene Name: | solute carrier family 16 (monocarboxylic acid transporters), member 5 |
| Gene Alias: | A130015N09Rik|MCT 5|MCT 6|MCT5 |
| Gene Description: | solute carrier family 16 (monocarboxylic acid transporters), member 5 |
| Gene Type: | protein-coding |
| CpG%: | 0.03 |
| GC%: | 0.532338 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
