Difference between revisions of "TSS:Mm 140300.1"
From referenceTSS
| Line 4: | Line 4: | ||
|Six3b= | |Six3b= | ||
|Six3beta= | |Six3beta= | ||
| − | |all_trans=BC098096:0 D83145:0 ENSMUST00000162695.2:-140 BC094426:-140 ENSMUST00000176081.2:-337 NM_011381:-337 | + | |all_trans=BC098096:0 D83145:0 ENSMUST00000162695.2:-140 BC094426:-140 ENSMUST00000176081.2:-337 NM_011381:-337 LF204072:421 MA439649:421 |
|chr=chr17 | |chr=chr17 | ||
|cpg_percent=0.02 | |cpg_percent=0.02 | ||
| Line 13: | Line 13: | ||
|entrez_id=20473 | |entrez_id=20473 | ||
|gc_percent=0.567164 | |gc_percent=0.567164 | ||
| − | |gene_alias=E130112M24Rik | + | |gene_alias=E130112M24Rik{{!}}Six3a{{!}}Six3alpha{{!}}Six3b{{!}}Six3beta |
|gene_description=sine oculis-related homeobox 3 | |gene_description=sine oculis-related homeobox 3 | ||
|gene_id=20473 | |gene_id=20473 | ||
Revision as of 07:51, 20 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 85621209 |
|---|---|
| End of the center position in the TSS region: | 85621210 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | BC098096 D83145 |
|---|---|
| Distance: | 0 |
| Num_trans: | 8 |
| All_trans: | BC098096:0 D83145:0 ENSMUST00000162695.2:-140 BC094426:-140 ENSMUST00000176081.2:-337 NM_011381:-337 LF204072:421 MA439649:421 |
TATA-Box annotation
| Distance to TSS: | 376 |
|---|---|
| Nearest PromoterID: | NM_011381 |
| Entrez ID: | 20473 |
| Nearest Unigene: | Mm.370208 |
| Nearest Refseq: | NM_011381 |
| Nearest Ensembl: | ENSMUSG00000038805 |
| Gene Name: | sine oculis-related homeobox 3 |
| Gene Alias: | E130112M24Rik|Six3a|Six3alpha|Six3b|Six3beta |
| Gene Description: | sine oculis-related homeobox 3 |
| Gene Type: | protein-coding |
| CpG%: | 0.02 |
| GC%: | 0.567164 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
