Difference between revisions of "TSS:Mm 159058.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENSMUST00000162650.7:139 NM_010778:140 NR_132621 | + | |all_trans=ENSMUST00000162650.7:139 NM_010778:140 NR_132621:140 AK006632:140 BC150660:140 AB010919:143 ENSMUST00000159563.7:163 AB001566:163 AB022600:163 |
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0.045 | |cpg_percent=0.045 | ||
| Line 10: | Line 10: | ||
|gc_percent=0.577114 | |gc_percent=0.577114 | ||
|gene_alias=Mcp | |gene_alias=Mcp | ||
| − | |gene_description= | + | |gene_description=CD46 antigen, complement regulatory protein |
|gene_id=17221 | |gene_id=17221 | ||
| − | |gene_name= | + | |gene_name=CD46 antigen, complement regulatory protein |
|gene_source=MGI:1203290 | |gene_source=MGI:1203290 | ||
|gene_symbol=Cd46 | |gene_symbol=Cd46 | ||
| Line 19: | Line 19: | ||
|hgnc_mgi_id=MGI:1203290 | |hgnc_mgi_id=MGI:1203290 | ||
|nearest_ensembl=ENSMUSG00000016493 | |nearest_ensembl=ENSMUSG00000016493 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NR_132621 |
|nearest_refseq=NM_010778 | |nearest_refseq=NM_010778 | ||
|nearest_unigene=Mm.12884 | |nearest_unigene=Mm.12884 | ||
| − | |num_trans= | + | |num_trans=9 |
|species=mouse | |species=mouse | ||
|start=195092387 | |start=195092387 | ||
Revision as of 15:06, 20 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 195092387 |
|---|---|
| End of the center position in the TSS region: | 195092388 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENSMUST00000162650.7 |
|---|---|
| Distance: | 139 |
| Num_trans: | 9 |
| All_trans: | ENSMUST00000162650.7:139 NM_010778:140 NR_132621:140 AK006632:140 BC150660:140 AB010919:143 ENSMUST00000159563.7:163 AB001566:163 AB022600:163 |
TATA-Box annotation
| Distance to TSS: | -140 |
|---|---|
| Nearest PromoterID: | NR_132621 |
| Entrez ID: | 17221 |
| Nearest Unigene: | Mm.12884 |
| Nearest Refseq: | NM_010778 |
| Nearest Ensembl: | ENSMUSG00000016493 |
| Gene Name: | CD46 antigen, complement regulatory protein |
| Gene Alias: | Mcp |
| Gene Description: | CD46 antigen, complement regulatory protein |
| Gene Type: | protein-coding |
| CpG%: | 0.045 |
| GC%: | 0.577114 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
