Difference between revisions of "TSS:Mm 55311.1"
From referenceTSS
| Line 3: | Line 3: | ||
|Gctg= | |Gctg= | ||
|Ggc= | |Ggc= | ||
| − | |all_trans=ENSMUST00000204301.2:0 ENSMUST00000203208.1:0 ENSMUST00000136527.1:0 NM_026637 | + | |all_trans=ENSMUST00000204301.2:0 ENSMUST00000203208.1:0 ENSMUST00000136527.1:0 NM_026637:0 AK028830:0 AK079465:0 AK008719:0 BC080818:12 AK141474:-38 ENSMUST00000131475.1:-72 AK050049:-72 ENSMUST00000002874.7:152 ENSMUST00000204770.1:235 AK137161:235 |
|chr=chr6 | |chr=chr6 | ||
|cpg_percent=0.095 | |cpg_percent=0.095 | ||
| Line 12: | Line 12: | ||
|entrez_id=110175 | |entrez_id=110175 | ||
|gc_percent=0.646766 | |gc_percent=0.646766 | ||
| − | |gene_alias=A030007L17Rik | + | |gene_alias=A030007L17Rik{{!}}AA673177{{!}}Gctg{{!}}Ggc |
|gene_description=gamma-glutamyl cyclotransferase | |gene_description=gamma-glutamyl cyclotransferase | ||
|gene_id=110175 | |gene_id=110175 | ||
| Line 25: | Line 25: | ||
|nearest_refseq=NM_026637 | |nearest_refseq=NM_026637 | ||
|nearest_unigene=Mm.294708 | |nearest_unigene=Mm.294708 | ||
| − | |num_trans= | + | |num_trans=14 |
|species=mouse | |species=mouse | ||
|start=54992858 | |start=54992858 | ||
|start_of_center_position=54992868 | |start_of_center_position=54992868 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENSMUST00000204301.2 ENSMUST00000203208.1 ENSMUST00000136527.1 NM_026637 | + | |transcript_name=ENSMUST00000204301.2 ENSMUST00000203208.1 ENSMUST00000136527.1 NM_026637 AK028830 AK079465 AK008719 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=mm_55311.1 | |tss_id=mm_55311.1 | ||
Revision as of 11:08, 21 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 54992868 |
|---|---|
| End of the center position in the TSS region: | 54992869 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENSMUST00000204301.2 ENSMUST00000203208.1 ENSMUST00000136527.1 NM_026637 AK028830 AK079465 AK008719 |
|---|---|
| Distance: | 0 |
| Num_trans: | 14 |
| All_trans: | ENSMUST00000204301.2:0 ENSMUST00000203208.1:0 ENSMUST00000136527.1:0 NM_026637:0 AK028830:0 AK079465:0 AK008719:0 BC080818:12 AK141474:-38 ENSMUST00000131475.1:-72 AK050049:-72 ENSMUST00000002874.7:152 ENSMUST00000204770.1:235 AK137161:235 |
TATA-Box annotation
| Distance to TSS: | -1 |
|---|---|
| Nearest PromoterID: | NM_026637 |
| Entrez ID: | 110175 |
| Nearest Unigene: | Mm.294708 |
| Nearest Refseq: | NM_026637 |
| Nearest Ensembl: | ENSMUSG00000002797 |
| Gene Name: | gamma-glutamyl cyclotransferase |
| Gene Alias: | A030007L17Rik|AA673177|Gctg|Ggc |
| Gene Description: | gamma-glutamyl cyclotransferase |
| Gene Type: | protein-coding |
| CpG%: | 0.095 |
| GC%: | 0.646766 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
