Difference between revisions of "TSS:Mm 76558.1"
From referenceTSS
| Line 2: | Line 2: | ||
|CELTIX1= | |CELTIX1= | ||
|Ptpn13ip= | |Ptpn13ip= | ||
| − | |all_trans=ENSMUST00000034085.7:0 NM_012047:0 | + | |all_trans=ENSMUST00000034085.7:0 NM_001377016:0 NM_012047:0 NM_001377017:0 NM_001377013:0 NR_165043:0 NR_165044:0 NR_165045:0 NM_001377014:0 NM_001377015:0 AK138934:0 AK142758:0 AF084259:2 ENSMUST00000135471.1:141 AK160638:197 BC166008:200 |
|chr=chr8 | |chr=chr8 | ||
|cpg_percent=0.165 | |cpg_percent=0.165 | ||
| Line 11: | Line 11: | ||
|entrez_id=26992 | |entrez_id=26992 | ||
|gc_percent=0.726368 | |gc_percent=0.726368 | ||
| − | |gene_alias=BP75 | + | |gene_alias=BP75{{!}}CELTIX1{{!}}Ptpn13ip |
|gene_description=bromodomain containing 7 | |gene_description=bromodomain containing 7 | ||
|gene_id=26992 | |gene_id=26992 | ||
| Line 24: | Line 24: | ||
|nearest_refseq=NM_012047 | |nearest_refseq=NM_012047 | ||
|nearest_unigene=Mm.5400 | |nearest_unigene=Mm.5400 | ||
| − | |num_trans= | + | |num_trans=16 |
|species=mouse | |species=mouse | ||
|start=88362154 | |start=88362154 | ||
|start_of_center_position=88362182 | |start_of_center_position=88362182 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENSMUST00000034085.7 NM_012047 | + | |transcript_name=ENSMUST00000034085.7 NM_001377016 NM_012047 NM_001377017 NM_001377013 NR_165043 NR_165044 NR_165045 NM_001377014 NM_001377015 AK138934 AK142758 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=mm_76558.1 | |tss_id=mm_76558.1 | ||
Revision as of 19:17, 21 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 88362182 |
|---|---|
| End of the center position in the TSS region: | 88362183 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENSMUST00000034085.7 NM_001377016 NM_012047 NM_001377017 NM_001377013 NR_165043 NR_165044 NR_165045 NM_001377014 NM_001377015 AK138934 AK142758 |
|---|---|
| Distance: | 0 |
| Num_trans: | 16 |
| All_trans: | ENSMUST00000034085.7:0 NM_001377016:0 NM_012047:0 NM_001377017:0 NM_001377013:0 NR_165043:0 NR_165044:0 NR_165045:0 NM_001377014:0 NM_001377015:0 AK138934:0 AK142758:0 AF084259:2 ENSMUST00000135471.1:141 AK160638:197 BC166008:200 |
TATA-Box annotation
| Distance to TSS: | 9 |
|---|---|
| Nearest PromoterID: | NM_012047 |
| Entrez ID: | 26992 |
| Nearest Unigene: | Mm.5400 |
| Nearest Refseq: | NM_012047 |
| Nearest Ensembl: | ENSMUSG00000031660 |
| Gene Name: | bromodomain containing 7 |
| Gene Alias: | BP75|CELTIX1|Ptpn13ip |
| Gene Description: | bromodomain containing 7 |
| Gene Type: | protein-coding |
| CpG%: | 0.165 |
| GC%: | 0.726368 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
