Difference between revisions of "TSS:Mm 83959.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=AK085949:-51 ENSMUST00000135527.1:-61 NR_045886 | + | |all_trans=AK085949:-51 ENSMUST00000135527.1:-61 NR_045886:-61 AK162906:-61 ENSMUST00000128125.1:73 AK143982:73 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.05 | |cpg_percent=0.05 | ||
| Line 9: | Line 9: | ||
|entrez_id=100038566 | |entrez_id=100038566 | ||
|gc_percent=0.512438 | |gc_percent=0.512438 | ||
| − | |gene_alias= | + | |gene_alias=- |
|gene_description=predicted gene 10658 | |gene_description=predicted gene 10658 | ||
|gene_id=100038566 | |gene_id=100038566 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NR_045886 | |nearest_refseq=NR_045886 | ||
|nearest_unigene=Mm.361900 | |nearest_unigene=Mm.361900 | ||
| − | |num_trans= | + | |num_trans=6 |
|species=mouse | |species=mouse | ||
|start=57071879 | |start=57071879 | ||
Revision as of 22:02, 21 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 57071892 |
|---|---|
| End of the center position in the TSS region: | 57071893 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | AK085949 |
|---|---|
| Distance: | -51 |
| Num_trans: | 6 |
| All_trans: | AK085949:-51 ENSMUST00000135527.1:-61 NR_045886:-61 AK162906:-61 ENSMUST00000128125.1:73 AK143982:73 |
TATA-Box annotation
| Distance to TSS: | 74 |
|---|---|
| Nearest PromoterID: | NR_045886 |
| Entrez ID: | 100038566 |
| Nearest Unigene: | Mm.361900 |
| Nearest Refseq: | NR_045886 |
| Nearest Ensembl: | |
| Gene Name: | predicted gene 10658 |
| Gene Alias: | - |
| Gene Description: | predicted gene 10658 |
| Gene Type: | ncRNA |
| CpG%: | 0.05 |
| GC%: | 0.512438 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
