Difference between revisions of "TSS:Mm 88408.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENSMUST00000099552.2:0 NR_045882 | + | |all_trans=ENSMUST00000099552.2:0 NR_045882:0 AK143813:0 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
| Line 9: | Line 9: | ||
|entrez_id=100038479 | |entrez_id=100038479 | ||
|gc_percent=0.477612 | |gc_percent=0.477612 | ||
| − | |gene_alias= | + | |gene_alias=- |
|gene_description=predicted gene 10787 | |gene_description=predicted gene 10787 | ||
|gene_id=100038479 | |gene_id=100038479 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NR_045882 | |nearest_refseq=NR_045882 | ||
|nearest_unigene=Mm.387034 | |nearest_unigene=Mm.387034 | ||
| − | |num_trans= | + | |num_trans=3 |
|species=mouse | |species=mouse | ||
|start=77011984 | |start=77011984 | ||
|start_of_center_position=77011994 | |start_of_center_position=77011994 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENSMUST00000099552.2 NR_045882 | + | |transcript_name=ENSMUST00000099552.2 NR_045882 AK143813 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=mm_88408.1 | |tss_id=mm_88408.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id=Q3UP50 |
}} | }} | ||
Revision as of 23:41, 21 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 77011994 |
|---|---|
| End of the center position in the TSS region: | 77011995 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENSMUST00000099552.2 NR_045882 AK143813 |
|---|---|
| Distance: | 0 |
| Num_trans: | 3 |
| All_trans: | ENSMUST00000099552.2:0 NR_045882:0 AK143813:0 |
TATA-Box annotation
| Distance to TSS: | 0 |
|---|---|
| Nearest PromoterID: | NR_045882 |
| Entrez ID: | 100038479 |
| Nearest Unigene: | Mm.387034 |
| Nearest Refseq: | NR_045882 |
| Nearest Ensembl: | ENSMUSG00000074919 |
| Gene Name: | predicted gene 10787 |
| Gene Alias: | - |
| Gene Description: | predicted gene 10787 |
| Gene Type: | ncRNA |
| CpG%: | 0.01 |
| GC%: | 0.477612 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
