Difference between revisions of "TSS:Mm 99240.1"
From referenceTSS
| Line 3: | Line 3: | ||
|E2DH= | |E2DH= | ||
|Hsd17ba= | |Hsd17ba= | ||
| − | |all_trans=ENSMUST00000019445.5:3 NM_010475 | + | |all_trans=ENSMUST00000019445.5:3 NM_010475:3 X89627:3 BC125657:4 BC125659:4 AK143346:55 LF203078:-455 MA438655:-455 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.025 | |cpg_percent=0.025 | ||
| Line 12: | Line 12: | ||
|entrez_id=15485 | |entrez_id=15485 | ||
|gc_percent=0.547264 | |gc_percent=0.547264 | ||
| − | |gene_alias=17HSDB1 | + | |gene_alias=17HSDB1{{!}}17beta-HSD{{!}}E2DH{{!}}Hsd17ba |
|gene_description=hydroxysteroid (17-beta) dehydrogenase 1 | |gene_description=hydroxysteroid (17-beta) dehydrogenase 1 | ||
|gene_id=15485 | |gene_id=15485 | ||
| Line 25: | Line 25: | ||
|nearest_refseq=NM_010475 | |nearest_refseq=NM_010475 | ||
|nearest_unigene=Mm.188939 | |nearest_unigene=Mm.188939 | ||
| − | |num_trans= | + | |num_trans=8 |
|species=mouse | |species=mouse | ||
|start=101078363 | |start=101078363 | ||
|start_of_center_position=101078385 | |start_of_center_position=101078385 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENSMUST00000019445.5 NM_010475 | + | |transcript_name=ENSMUST00000019445.5 NM_010475 X89627 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=mm_99240.1 | |tss_id=mm_99240.1 | ||
Revision as of 03:47, 22 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 101078385 |
|---|---|
| End of the center position in the TSS region: | 101078386 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENSMUST00000019445.5 NM_010475 X89627 |
|---|---|
| Distance: | 3 |
| Num_trans: | 8 |
| All_trans: | ENSMUST00000019445.5:3 NM_010475:3 X89627:3 BC125657:4 BC125659:4 AK143346:55 LF203078:-455 MA438655:-455 |
TATA-Box annotation
| Distance to TSS: | -25 |
|---|---|
| Nearest PromoterID: | NM_010475 |
| Entrez ID: | 15485 |
| Nearest Unigene: | Mm.188939 |
| Nearest Refseq: | NM_010475 |
| Nearest Ensembl: | ENSMUSG00000019301 |
| Gene Name: | hydroxysteroid (17-beta) dehydrogenase 1 |
| Gene Alias: | 17HSDB1|17beta-HSD|E2DH|Hsd17ba |
| Gene Description: | hydroxysteroid (17-beta) dehydrogenase 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.025 |
| GC%: | 0.547264 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
