Difference between revisions of "TSS:Mm 99251.1"
From referenceTSS
| Line 2: | Line 2: | ||
|4933404C01Rik= | |4933404C01Rik= | ||
|AI551748= | |AI551748= | ||
| − | |all_trans=ENSMUST00000043680.8:0 | + | |all_trans=ENSMUST00000043680.8:0 LF198889:0 MA434466:0 NM_134024:168 AK160125:170 BC006581:182 AK192509:211 AK183189:211 AK154019:214 AB158480:215 AK196283:283 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.165 | |cpg_percent=0.165 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss=- | + | |distance_to_tss=-92 |
|end=101119949 | |end=101119949 | ||
|end_of_center_position=101119934 | |end_of_center_position=101119934 | ||
|entrez_id=67998 | |entrez_id=67998 | ||
|gc_percent=0.686567 | |gc_percent=0.686567 | ||
| − | |gene_alias=1300010M03Rik | + | |gene_alias=1300010M03Rik{{!}}4933404C01Rik{{!}}AI551748{{!}}Fam134c |
| − | |gene_description= | + | |gene_description=reticulophagy regulator family member 3 |
|gene_id=103733 | |gene_id=103733 | ||
| − | |gene_name= | + | |gene_name=tubulin, gamma 1 |
|gene_source=MGI:101834 | |gene_source=MGI:101834 | ||
|gene_symbol=Tubg1 | |gene_symbol=Tubg1 | ||
| Line 21: | Line 21: | ||
|hgnc_mgi_id=MGI:101834 | |hgnc_mgi_id=MGI:101834 | ||
|nearest_ensembl=ENSMUSG00000017802 | |nearest_ensembl=ENSMUSG00000017802 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_026501 |
|nearest_refseq=NM_026501 | |nearest_refseq=NM_026501 | ||
|nearest_unigene=Mm.33881 | |nearest_unigene=Mm.33881 | ||
| − | |num_trans= | + | |num_trans=11 |
|species=mouse | |species=mouse | ||
|start=101119917 | |start=101119917 | ||
|start_of_center_position=101119933 | |start_of_center_position=101119933 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENSMUST00000043680.8 | + | |transcript_name=ENSMUST00000043680.8 LF198889 MA434466 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=mm_99251.1 | |tss_id=mm_99251.1 | ||
Revision as of 03:47, 22 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 101119933 |
|---|---|
| End of the center position in the TSS region: | 101119934 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENSMUST00000043680.8 LF198889 MA434466 |
|---|---|
| Distance: | 0 |
| Num_trans: | 11 |
| All_trans: | ENSMUST00000043680.8:0 LF198889:0 MA434466:0 NM_134024:168 AK160125:170 BC006581:182 AK192509:211 AK183189:211 AK154019:214 AB158480:215 AK196283:283 |
TATA-Box annotation
| Distance to TSS: | -92 |
|---|---|
| Nearest PromoterID: | NM_026501 |
| Entrez ID: | 67998 |
| Nearest Unigene: | Mm.33881 |
| Nearest Refseq: | NM_026501 |
| Nearest Ensembl: | ENSMUSG00000017802 |
| Gene Name: | tubulin, gamma 1 |
| Gene Alias: | 1300010M03Rik|4933404C01Rik|AI551748|Fam134c |
| Gene Description: | reticulophagy regulator family member 3 |
| Gene Type: | protein-coding |
| CpG%: | 0.165 |
| GC%: | 0.686567 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
