Difference between revisions of "TSS:Mm 99366.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=AK220485:0 BC132445:-6 AK172600:9 AK078552:10 AK142226:16 BC065064:19 ENSMUST00000156842.1:21 AK170616:21 NM_144831 | + | |all_trans=AK220485:0 BC132445:-6 AK172600:9 AK078552:10 AK142226:16 BC065064:19 ENSMUST00000156842.1:21 AK170616:21 NM_144831:-22 AK153829:-22 ENSMUST00000039152.13:-28 ENSMUST00000129741.1:33 ENSMUST00000125409.1:-59 LF198903:-60 MA434480:-60 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.085 | |cpg_percent=0.085 | ||
| Line 9: | Line 9: | ||
|entrez_id=217207 | |entrez_id=217207 | ||
|gc_percent=0.60199 | |gc_percent=0.60199 | ||
| − | |gene_alias=Ddx8 | + | |gene_alias=Ddx8{{!}}mDEAH6{{!}}mKIAA4096 |
|gene_description=DEAH (Asp-Glu-Ala-His) box polypeptide 8 | |gene_description=DEAH (Asp-Glu-Ala-His) box polypeptide 8 | ||
|gene_id=217207 | |gene_id=217207 | ||
| Line 24: | Line 24: | ||
|nearest_refseq=NM_144831 | |nearest_refseq=NM_144831 | ||
|nearest_unigene=Mm.28186 | |nearest_unigene=Mm.28186 | ||
| − | |num_trans= | + | |num_trans=15 |
|species=mouse | |species=mouse | ||
|start=101732977 | |start=101732977 | ||
Revision as of 03:50, 22 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 101732992 |
|---|---|
| End of the center position in the TSS region: | 101732993 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | AK220485 |
|---|---|
| Distance: | 0 |
| Num_trans: | 15 |
| All_trans: | AK220485:0 BC132445:-6 AK172600:9 AK078552:10 AK142226:16 BC065064:19 ENSMUST00000156842.1:21 AK170616:21 NM_144831:-22 AK153829:-22 ENSMUST00000039152.13:-28 ENSMUST00000129741.1:33 ENSMUST00000125409.1:-59 LF198903:-60 MA434480:-60 |
TATA-Box annotation
| Distance to TSS: | 37 |
|---|---|
| Nearest PromoterID: | NM_144831 |
| Entrez ID: | 217207 |
| Nearest Unigene: | Mm.28186 |
| Nearest Refseq: | NM_144831 |
| Nearest Ensembl: | ENSMUSG00000034931 |
| Gene Name: | DEAH (Asp-Glu-Ala-His) box polypeptide 8 |
| Gene Alias: | Ddx8|mDEAH6|mKIAA4096 |
| Gene Description: | DEAH (Asp-Glu-Ala-His) box polypeptide 8 |
| Gene Type: | protein-coding |
| CpG%: | 0.085 |
| GC%: | 0.60199 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
