Difference between revisions of "TSS:Mm 99415.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENSMUST00000156326.1:0 BC029841:26 AK008158:-157 BC016187:-174 AK157408:-183 AK132118:-201 ENSMUST00000156077.1:-211 | + | |all_trans=ENSMUST00000156326.1:0 BC029841:26 AK008158:-157 BC016187:-174 AK157408:-183 AK132118:-201 ENSMUST00000156077.1:-211 NM_001302506:-211 NM_001302505:-211 NM_028076:-211 ENSMUST00000135551.1:-223 ENSMUST00000100387.10:-223 ENSMUST00000036376.12:-231 LF198917:-232 MA434494:-232 AK203064:442 AK189296:442 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.055 | |cpg_percent=0.055 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=255 |
|end=102285251 | |end=102285251 | ||
|end_of_center_position=102285207 | |end_of_center_position=102285207 | ||
| Line 19: | Line 19: | ||
|hgnc_mgi_id=MGI:1919303 | |hgnc_mgi_id=MGI:1919303 | ||
|nearest_ensembl=ENSMUSG00000034757 | |nearest_ensembl=ENSMUSG00000034757 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001302506 |
|nearest_refseq=NM_028076 | |nearest_refseq=NM_028076 | ||
|nearest_unigene=Mm.101274 | |nearest_unigene=Mm.101274 | ||
| − | |num_trans= | + | |num_trans=17 |
|species=mouse | |species=mouse | ||
|start=102285161 | |start=102285161 | ||
Revision as of 03:51, 22 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 102285206 |
|---|---|
| End of the center position in the TSS region: | 102285207 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENSMUST00000156326.1 |
|---|---|
| Distance: | 0 |
| Num_trans: | 17 |
| All_trans: | ENSMUST00000156326.1:0 BC029841:26 AK008158:-157 BC016187:-174 AK157408:-183 AK132118:-201 ENSMUST00000156077.1:-211 NM_001302506:-211 NM_001302505:-211 NM_028076:-211 ENSMUST00000135551.1:-223 ENSMUST00000100387.10:-223 ENSMUST00000036376.12:-231 LF198917:-232 MA434494:-232 AK203064:442 AK189296:442 |
TATA-Box annotation
| Distance to TSS: | 255 |
|---|---|
| Nearest PromoterID: | NM_001302506 |
| Entrez ID: | 72053 |
| Nearest Unigene: | Mm.101274 |
| Nearest Refseq: | NM_028076 |
| Nearest Ensembl: | ENSMUSG00000034757 |
| Gene Name: | transmembrane and ubiquitin-like domain containing 2 |
| Gene Alias: | 2010008E23Rik |
| Gene Description: | transmembrane and ubiquitin-like domain containing 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.055 |
| GC%: | 0.61194 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
