Difference between revisions of "TSS:Mm 99495.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENSMUST00000159834.1:0 | + | |all_trans=ENSMUST00000159834.1:0 NM_001364757:0 NM_028492:0 AK032002:0 BC119102:0 BC119104:0 BC144894:0 ENSMUST00000021307.9:-12 AK006639:46 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.055 | |cpg_percent=0.055 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=7 |
|end=102881246 | |end=102881246 | ||
|end_of_center_position=102881231 | |end_of_center_position=102881231 | ||
| Line 19: | Line 19: | ||
|hgnc_mgi_id=MGI:1920543 | |hgnc_mgi_id=MGI:1920543 | ||
|nearest_ensembl=ENSMUSG00000020930 | |nearest_ensembl=ENSMUSG00000020930 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001364757 |
|nearest_refseq=NM_028492 | |nearest_refseq=NM_028492 | ||
|nearest_unigene=Mm.67659 | |nearest_unigene=Mm.67659 | ||
| Line 27: | Line 27: | ||
|start_of_center_position=102881230 | |start_of_center_position=102881230 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENSMUST00000159834.1 NM_028492 | + | |transcript_name=ENSMUST00000159834.1 NM_001364757 NM_028492 AK032002 BC119102 BC119104 BC144894 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=mm_99495.1 | |tss_id=mm_99495.1 | ||
Revision as of 03:52, 22 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 102881230 |
|---|---|
| End of the center position in the TSS region: | 102881231 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENSMUST00000159834.1 NM_001364757 NM_028492 AK032002 BC119102 BC119104 BC144894 |
|---|---|
| Distance: | 0 |
| Num_trans: | 9 |
| All_trans: | ENSMUST00000159834.1:0 NM_001364757:0 NM_028492:0 AK032002:0 BC119102:0 BC119104:0 BC144894:0 ENSMUST00000021307.9:-12 AK006639:46 |
TATA-Box annotation
| Distance to TSS: | 7 |
|---|---|
| Nearest PromoterID: | NM_001364757 |
| Entrez ID: | 73293 |
| Nearest Unigene: | Mm.67659 |
| Nearest Refseq: | NM_028492 |
| Nearest Ensembl: | ENSMUSG00000020930 |
| Gene Name: | coiled-coil domain containing 103 |
| Gene Alias: | 1700039D13Rik |
| Gene Description: | coiled-coil domain containing 103 |
| Gene Type: | protein-coding |
| CpG%: | 0.055 |
| GC%: | 0.587065 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
