Difference between revisions of "TSS:Mm 99525.1"
From referenceTSS
| Line 4: | Line 4: | ||
|Fnrl= | |Fnrl= | ||
|Frls= | |Frls= | ||
| − | |all_trans=ENSMUST00000042286.11:277 | + | |all_trans=ENSMUST00000042286.11:277 ENSMUST00000218163.1:277 NM_019679:308 NM_001077698:308 BC148411:478 BC156635:478 ENSMUST00000107027.8:483 AF215666:483 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.125 | |cpg_percent=0.125 | ||
| Line 13: | Line 13: | ||
|entrez_id=57778 | |entrez_id=57778 | ||
|gc_percent=0.766169 | |gc_percent=0.766169 | ||
| − | |gene_alias=8030453N10Rik | + | |gene_alias=8030453N10Rik{{!}}AI553564{{!}}Fmnl{{!}}Fnrl{{!}}Frls |
|gene_description=formin-like 1 | |gene_description=formin-like 1 | ||
|gene_id=57778 | |gene_id=57778 | ||
| Line 23: | Line 23: | ||
|hgnc_mgi_id=MGI:1888994 | |hgnc_mgi_id=MGI:1888994 | ||
|nearest_ensembl=ENSMUSG00000055805 | |nearest_ensembl=ENSMUSG00000055805 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_019679 |
|nearest_refseq=NM_019679 | |nearest_refseq=NM_019679 | ||
|nearest_unigene=Mm.138913 | |nearest_unigene=Mm.138913 | ||
| − | |num_trans= | + | |num_trans=8 |
|species=mouse | |species=mouse | ||
|start=103170757 | |start=103170757 | ||
|start_of_center_position=103170793 | |start_of_center_position=103170793 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENSMUST00000042286.11 | + | |transcript_name=ENSMUST00000042286.11 ENSMUST00000218163.1 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=mm_99525.1 | |tss_id=mm_99525.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id=Q9JL26 | + | |uniprot_id=A0A1W2P6X3 Q9JL26 |
}} | }} | ||
Revision as of 03:53, 22 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 103170793 |
|---|---|
| End of the center position in the TSS region: | 103170794 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENSMUST00000042286.11 ENSMUST00000218163.1 |
|---|---|
| Distance: | 277 |
| Num_trans: | 8 |
| All_trans: | ENSMUST00000042286.11:277 ENSMUST00000218163.1:277 NM_019679:308 NM_001077698:308 BC148411:478 BC156635:478 ENSMUST00000107027.8:483 AF215666:483 |
TATA-Box annotation
| Distance to TSS: | -344 |
|---|---|
| Nearest PromoterID: | NM_019679 |
| Entrez ID: | 57778 |
| Nearest Unigene: | Mm.138913 |
| Nearest Refseq: | NM_019679 |
| Nearest Ensembl: | ENSMUSG00000055805 |
| Gene Name: | formin-like 1 |
| Gene Alias: | 8030453N10Rik|AI553564|Fmnl|Fnrl|Frls |
| Gene Description: | formin-like 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.125 |
| GC%: | 0.766169 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
