Difference between revisions of "TSS:Mm 99577.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|IMP5= | |IMP5= | ||
| − | |all_trans=BC090973:0 BC100418:0 ENSMUST00000107000.1:-19 ENSMUST00000059448.7 | + | |all_trans=BC090973:0 BC100418:0 ENSMUST00000107000.1:-19 ENSMUST00000059448.7:-19 NM_199019:-19 NM_001082535:-19 AK077122:-19 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
| Line 10: | Line 10: | ||
|entrez_id=237958 | |entrez_id=237958 | ||
|gc_percent=0.621891 | |gc_percent=0.621891 | ||
| − | |gene_alias=4933407P14Rik | + | |gene_alias=4933407P14Rik{{!}}IMP5 |
|gene_description=signal peptide peptidase 2C | |gene_description=signal peptide peptidase 2C | ||
|gene_id=237958 | |gene_id=237958 | ||
| Line 20: | Line 20: | ||
|hgnc_mgi_id=MGI:3045264 | |hgnc_mgi_id=MGI:3045264 | ||
|nearest_ensembl=ENSMUSG00000049506 | |nearest_ensembl=ENSMUSG00000049506 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001082535 |
|nearest_refseq=NM_199019 | |nearest_refseq=NM_199019 | ||
|nearest_unigene=Mm.117063 | |nearest_unigene=Mm.117063 | ||
| − | |num_trans= | + | |num_trans=7 |
|species=mouse | |species=mouse | ||
|start=104186345 | |start=104186345 | ||
Revision as of 03:54, 22 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 104186351 |
|---|---|
| End of the center position in the TSS region: | 104186352 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | BC090973 BC100418 |
|---|---|
| Distance: | 0 |
| Num_trans: | 7 |
| All_trans: | BC090973:0 BC100418:0 ENSMUST00000107000.1:-19 ENSMUST00000059448.7:-19 NM_199019:-19 NM_001082535:-19 AK077122:-19 |
TATA-Box annotation
| Distance to TSS: | 25 |
|---|---|
| Nearest PromoterID: | NM_001082535 |
| Entrez ID: | 237958 |
| Nearest Unigene: | Mm.117063 |
| Nearest Refseq: | NM_199019 |
| Nearest Ensembl: | ENSMUSG00000049506 |
| Gene Name: | signal peptide peptidase 2C |
| Gene Alias: | 4933407P14Rik|IMP5 |
| Gene Description: | signal peptide peptidase 2C |
| Gene Type: | protein-coding |
| CpG%: | 0.01 |
| GC%: | 0.621891 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
