Difference between revisions of "TSS:Mm 99617.1"
From referenceTSS
| Line 2: | Line 2: | ||
|GP3A= | |GP3A= | ||
|INGRB3= | |INGRB3= | ||
| − | |all_trans=AK157958:17 AF026509:19 ENSMUST00000021028.4:-27 NM_016780:-27 | + | |all_trans=AK157958:17 AF026509:19 ENSMUST00000021028.4:-27 NM_016780:-27 BC125518:-27 BC125520:-27 LF204987:-28 LF198938:-28 MA440564:-28 MA434515:-28 AY541673:49 U83167:52 LF203088:-473 MA438665:-473 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.12 | |cpg_percent=0.12 | ||
| Line 11: | Line 11: | ||
|entrez_id=16416 | |entrez_id=16416 | ||
|gc_percent=0.746269 | |gc_percent=0.746269 | ||
| − | |gene_alias=CD61 | + | |gene_alias=CD61{{!}}GP3A{{!}}INGRB3 |
|gene_description=integrin beta 3 | |gene_description=integrin beta 3 | ||
|gene_id=16416 | |gene_id=16416 | ||
| Line 24: | Line 24: | ||
|nearest_refseq=NM_016780 | |nearest_refseq=NM_016780 | ||
|nearest_unigene=Mm.87150 | |nearest_unigene=Mm.87150 | ||
| − | |num_trans= | + | |num_trans=14 |
|species=mouse | |species=mouse | ||
|start=104608026 | |start=104608026 | ||
Revision as of 03:55, 22 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 104608031 |
|---|---|
| End of the center position in the TSS region: | 104608032 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | AK157958 |
|---|---|
| Distance: | 17 |
| Num_trans: | 14 |
| All_trans: | AK157958:17 AF026509:19 ENSMUST00000021028.4:-27 NM_016780:-27 BC125518:-27 BC125520:-27 LF204987:-28 LF198938:-28 MA440564:-28 MA434515:-28 AY541673:49 U83167:52 LF203088:-473 MA438665:-473 |
TATA-Box annotation
| Distance to TSS: | 32 |
|---|---|
| Nearest PromoterID: | NM_016780 |
| Entrez ID: | 16416 |
| Nearest Unigene: | Mm.87150 |
| Nearest Refseq: | NM_016780 |
| Nearest Ensembl: | ENSMUSG00000020689 |
| Gene Name: | integrin beta 3 |
| Gene Alias: | CD61|GP3A|INGRB3 |
| Gene Description: | integrin beta 3 |
| Gene Type: | protein-coding |
| CpG%: | 0.12 |
| GC%: | 0.746269 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
