Difference between revisions of "TSS:Mm 99628.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=NM_001081046 | + | |all_trans=NM_001081046:0 BC050801:0 AK014861:0 ENSMUST00000021029.5:-8 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.03 | |cpg_percent=0.03 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_001081046 | |nearest_refseq=NM_001081046 | ||
|nearest_unigene=Mm.87320 | |nearest_unigene=Mm.87320 | ||
| − | |num_trans= | + | |num_trans=4 |
|species=mouse | |species=mouse | ||
|start=105092213 | |start=105092213 | ||
|start_of_center_position=105092228 | |start_of_center_position=105092228 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=NM_001081046 | + | |transcript_name=NM_001081046 BC050801 AK014861 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=mm_99628.1 | |tss_id=mm_99628.1 | ||
Revision as of 03:55, 22 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 105092228 |
|---|---|
| End of the center position in the TSS region: | 105092229 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | NM_001081046 BC050801 AK014861 |
|---|---|
| Distance: | 0 |
| Num_trans: | 4 |
| All_trans: | NM_001081046:0 BC050801:0 AK014861:0 ENSMUST00000021029.5:-8 |
TATA-Box annotation
| Distance to TSS: | 10 |
|---|---|
| Nearest PromoterID: | NM_001081046 |
| Entrez ID: | 70894 |
| Nearest Unigene: | Mm.87320 |
| Nearest Refseq: | NM_001081046 |
| Nearest Ensembl: | ENSMUSG00000020690 |
| Gene Name: | EF-hand calcium binding domain 3 |
| Gene Alias: | 4921510J17Rik |
| Gene Description: | EF-hand calcium binding domain 3 |
| Gene Type: | protein-coding |
| CpG%: | 0.03 |
| GC%: | 0.447761 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
