Difference between revisions of "TSS:Mm 99650.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
|5730590C14Rik= | |5730590C14Rik= | ||
| − | |all_trans=AK019982:148 ENSMUST00000168598.7:151 NM_181071 | + | |all_trans=AK019982:148 ENSMUST00000168598.7:151 NM_181071:151 ENSMUST00000100330.9:156 AK051973:156 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.185 | |cpg_percent=0.185 | ||
| Line 10: | Line 10: | ||
|entrez_id=77097 | |entrez_id=77097 | ||
|gc_percent=0.855721 | |gc_percent=0.855721 | ||
| − | |gene_alias=3526402J09Rik | + | |gene_alias=3526402J09Rik{{!}}5730590C14Rik |
| − | |gene_description= | + | |gene_description=tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 |
|gene_id=77097 | |gene_id=77097 | ||
| − | |gene_name= | + | |gene_name=tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 |
|gene_source=MGI:2444121 | |gene_source=MGI:2444121 | ||
|gene_symbol=Tanc2 | |gene_symbol=Tanc2 | ||
| Line 23: | Line 23: | ||
|nearest_refseq=NM_175492 | |nearest_refseq=NM_175492 | ||
|nearest_unigene=Mm.22501 | |nearest_unigene=Mm.22501 | ||
| − | |num_trans= | + | |num_trans=5 |
|species=mouse | |species=mouse | ||
|start=105589828 | |start=105589828 | ||
Revision as of 03:56, 22 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 105589831 |
|---|---|
| End of the center position in the TSS region: | 105589832 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | AK019982 |
|---|---|
| Distance: | 148 |
| Num_trans: | 5 |
| All_trans: | AK019982:148 ENSMUST00000168598.7:151 NM_181071:151 ENSMUST00000100330.9:156 AK051973:156 |
TATA-Box annotation
| Distance to TSS: | -154 |
|---|---|
| Nearest PromoterID: | NM_181071 |
| Entrez ID: | 77097 |
| Nearest Unigene: | Mm.22501 |
| Nearest Refseq: | NM_175492 |
| Nearest Ensembl: | ENSMUSG00000053580 |
| Gene Name: | tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 |
| Gene Alias: | 3526402J09Rik|5730590C14Rik |
| Gene Description: | tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.185 |
| GC%: | 0.855721 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
