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Difference between revisions of "TSS:Mm 99661.1"

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Line 1: Line 1:
 
{{TSSDetail
 
{{TSSDetail
|all_trans=ENSMUST00000147975.1:73 uc007lxq.1:73 AK084601:73
+
|all_trans=ENSMUST00000147975.1:73 AK084601:73
 
|chr=chr11
 
|chr=chr11
 
|cpg_percent=0
 
|cpg_percent=0
 
|distance=73
 
|distance=73
|distance_to_tss=42244
+
|distance_to_tss=42584
 
|end=105901910
 
|end=105901910
 
|end_of_center_position=105901904
 
|end_of_center_position=105901904
Line 12: Line 12:
 
|gene_description=cytochrome b-561
 
|gene_description=cytochrome b-561
 
|gene_id=77097
 
|gene_id=77097
|gene_name="tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2"
+
|gene_name=tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2
 
|gene_source=MGI:2444121
 
|gene_source=MGI:2444121
 
|gene_symbol=Tanc2
 
|gene_symbol=Tanc2
Line 19: Line 19:
 
|hgnc_mgi_id=MGI:2444121
 
|hgnc_mgi_id=MGI:2444121
 
|nearest_ensembl=ENSMUSG00000019590
 
|nearest_ensembl=ENSMUSG00000019590
|nearest_promoter_id=NM_007805
+
|nearest_promoter_id=NM_001356374
 
|nearest_refseq=NM_007805
 
|nearest_refseq=NM_007805
 
|nearest_unigene=Mm.149403
 
|nearest_unigene=Mm.149403
|num_trans=3
+
|num_trans=2
 
|species=mouse
 
|species=mouse
 
|start=105901896
 
|start=105901896
 
|start_of_center_position=105901903
 
|start_of_center_position=105901903
 
|strand=+
 
|strand=+
|transcript_name=ENSMUST00000147975.1 uc007lxq.1 AK084601
+
|transcript_name=ENSMUST00000147975.1 AK084601
 
|tss_classification=no
 
|tss_classification=no
 
|tss_id=mm_99661.1
 
|tss_id=mm_99661.1

Revision as of 03:56, 22 June 2021

Basic information about the TSS


TSS ID:mm_99661.1
Species:mouse
Chr:chr11
TSS Classification:no
Start:105901896
End:105901910
Strand:+
TSS Score:1
Start of the center position in the TSS region:105901903
End of the center position in the TSS region:105901904



Gene and protein annotation


Transcript_name:ENSMUST00000147975.1 AK084601
Distance:73
GeneID:77097
HGNC/MGI_ID:MGI:2444121
UniProt_ID:Q8BUK5
Gene_name:tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2
Gene_symbol:Tanc2
Gene_synonyms:3526402J09Rik 5730590C14Rik
Gene_source:MGI:2444121



Transcript annotation


Transcript_name:ENSMUST00000147975.1 AK084601
Distance:73
Num_trans:2
All_trans:ENSMUST00000147975.1:73 AK084601:73



TATA-Box annotation


Distance to TSS:42584
Nearest PromoterID:NM_001356374
Entrez ID:13056
Nearest Unigene:Mm.149403
Nearest Refseq:NM_007805
Nearest Ensembl:ENSMUSG00000019590
Gene Name:tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2
Gene Alias:-
Gene Description:cytochrome b-561
Gene Type:protein-coding
CpG%:0
GC%:0.308458
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):