Difference between revisions of "TSS:Mm 99735.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENSMUST00000106816.7:79 NM_029345 | + | |all_trans=ENSMUST00000106816.7:79 NM_029345:79 AK153786:79 ENSMUST00000188561.6:98 ENSMUST00000190795.6:98 ENSMUST00000185986.6:98 ENSMUST00000190268.1:98 BC116232:-411 BC116233:-411 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.025 | |cpg_percent=0.025 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_029345 | |nearest_refseq=NM_029345 | ||
|nearest_unigene=Mm.159539 | |nearest_unigene=Mm.159539 | ||
| − | |num_trans= | + | |num_trans=9 |
|species=mouse | |species=mouse | ||
|start=106374734 | |start=106374734 | ||
|start_of_center_position=106374740 | |start_of_center_position=106374740 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENSMUST00000106816.7 NM_029345 | + | |transcript_name=ENSMUST00000106816.7 NM_029345 AK153786 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=mm_99735.1 | |tss_id=mm_99735.1 | ||
Revision as of 03:58, 22 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 106374740 |
|---|---|
| End of the center position in the TSS region: | 106374741 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENSMUST00000106816.7 NM_029345 AK153786 |
|---|---|
| Distance: | 79 |
| Num_trans: | 9 |
| All_trans: | ENSMUST00000106816.7:79 NM_029345:79 AK153786:79 ENSMUST00000188561.6:98 ENSMUST00000190795.6:98 ENSMUST00000185986.6:98 ENSMUST00000190268.1:98 BC116232:-411 BC116233:-411 |
TATA-Box annotation
| Distance to TSS: | -85 |
|---|---|
| Nearest PromoterID: | NM_029345 |
| Entrez ID: | 75573 |
| Nearest Unigene: | Mm.159539 |
| Nearest Refseq: | NM_029345 |
| Nearest Ensembl: | ENSMUSG00000009210 |
| Gene Name: | proline rich 29 |
| Gene Alias: | 2310007L24Rik |
| Gene Description: | proline rich 29 |
| Gene Type: | protein-coding |
| CpG%: | 0.025 |
| GC%: | 0.61194 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
