Difference between revisions of "TSS:Mm 99736.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENSMUST00000106816.7:19 NM_029345 | + | |all_trans=ENSMUST00000106816.7:19 NM_029345:19 AK153786:19 ENSMUST00000188561.6:38 ENSMUST00000190795.6:38 ENSMUST00000185986.6:38 ENSMUST00000190268.1:38 BC116232:-476 BC116233:-476 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.025 | |cpg_percent=0.025 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_029345 | |nearest_refseq=NM_029345 | ||
|nearest_unigene=Mm.159539 | |nearest_unigene=Mm.159539 | ||
| − | |num_trans= | + | |num_trans=9 |
|species=mouse | |species=mouse | ||
|start=106374799 | |start=106374799 | ||
|start_of_center_position=106374803 | |start_of_center_position=106374803 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENSMUST00000106816.7 NM_029345 | + | |transcript_name=ENSMUST00000106816.7 NM_029345 AK153786 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=mm_99736.1 | |tss_id=mm_99736.1 | ||
Revision as of 03:58, 22 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 106374803 |
|---|---|
| End of the center position in the TSS region: | 106374804 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENSMUST00000106816.7 NM_029345 AK153786 |
|---|---|
| Distance: | 19 |
| Num_trans: | 9 |
| All_trans: | ENSMUST00000106816.7:19 NM_029345:19 AK153786:19 ENSMUST00000188561.6:38 ENSMUST00000190795.6:38 ENSMUST00000185986.6:38 ENSMUST00000190268.1:38 BC116232:-476 BC116233:-476 |
TATA-Box annotation
| Distance to TSS: | -23 |
|---|---|
| Nearest PromoterID: | NM_029345 |
| Entrez ID: | 75573 |
| Nearest Unigene: | Mm.159539 |
| Nearest Refseq: | NM_029345 |
| Nearest Ensembl: | ENSMUSG00000009210 |
| Gene Name: | proline rich 29 |
| Gene Alias: | 2310007L24Rik |
| Gene Description: | proline rich 29 |
| Gene Type: | protein-coding |
| CpG%: | 0.025 |
| GC%: | 0.616915 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
