Difference between revisions of "TSS:Mm 99756.1"
From referenceTSS
| Line 2: | Line 2: | ||
|Gm885= | |Gm885= | ||
|Mca32= | |Mca32= | ||
| − | |all_trans=ENSMUST00000183111.7:0 ENSMUST00000106794.8:0 ENSMUST00000182023.1:0 AK169925:0 AB542953:0 AK136488:0 AK171381:0 AK137500:0 AK151814:0 AK170947:0 ENSMUST00000182896.7:-16 ENSMUST00000182908.7:-16 ENSMUST00000086353.10:-16 BC139224:-16 BC139225:-16 BC145580:-16 BC145582:-16 ENSMUST00000147326.8:-30 | + | |all_trans=ENSMUST00000183111.7:0 ENSMUST00000106794.8:0 ENSMUST00000182023.1:0 AK169925:0 AB542953:0 AK136488:0 AK171381:0 AK137500:0 AK151814:0 AK170947:0 ENSMUST00000182896.7:-16 ENSMUST00000182908.7:-16 ENSMUST00000086353.10:-16 BC139224:-16 BC139225:-16 BC145580:-16 BC145582:-16 ENSMUST00000147326.8:-30 NM_001271373:-30 NM_001271372:-30 NM_001271374:-30 NM_001271375:-30 NM_001033435:-30 NR_073165:-30 AK153506:41 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.025 | |cpg_percent=0.025 | ||
| Line 11: | Line 11: | ||
|entrez_id=380732 | |entrez_id=380732 | ||
|gc_percent=0.472637 | |gc_percent=0.472637 | ||
| − | |gene_alias=Allergin-1 | + | |gene_alias=Allergin-1{{!}}Gm885{{!}}Mca32 |
|gene_description=mast cell immunoglobulin like receptor 1 | |gene_description=mast cell immunoglobulin like receptor 1 | ||
|gene_id=380732 | |gene_id=380732 | ||
| Line 21: | Line 21: | ||
|hgnc_mgi_id=MGI:2685731 | |hgnc_mgi_id=MGI:2685731 | ||
|nearest_ensembl=ENSMUSG00000040528 | |nearest_ensembl=ENSMUSG00000040528 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NR_073165 |
|nearest_refseq=NM_001033435 | |nearest_refseq=NM_001033435 | ||
|nearest_unigene=Mm.343952 | |nearest_unigene=Mm.343952 | ||
| − | |num_trans= | + | |num_trans=25 |
|species=mouse | |species=mouse | ||
|start=106751255 | |start=106751255 | ||
| Line 33: | Line 33: | ||
|tss_id=mm_99756.1 | |tss_id=mm_99756.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id=A0A0B4J1N6 Q3TB92 | + | |uniprot_id=A0A0B4J1N6 A0A140T8Q6 Q3TB92 |
}} | }} | ||
Revision as of 03:58, 22 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 106751267 |
|---|---|
| End of the center position in the TSS region: | 106751268 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENSMUST00000183111.7 ENSMUST00000106794.8 ENSMUST00000182023.1 AK169925 AB542953 AK136488 AK171381 AK137500 AK151814 AK170947 |
|---|---|
| Distance: | 0 |
| Num_trans: | 25 |
| All_trans: | ENSMUST00000183111.7:0 ENSMUST00000106794.8:0 ENSMUST00000182023.1:0 AK169925:0 AB542953:0 AK136488:0 AK171381:0 AK137500:0 AK151814:0 AK170947:0 ENSMUST00000182896.7:-16 ENSMUST00000182908.7:-16 ENSMUST00000086353.10:-16 BC139224:-16 BC139225:-16 BC145580:-16 BC145582:-16 ENSMUST00000147326.8:-30 NM_001271373:-30 NM_001271372:-30 NM_001271374:-30 NM_001271375:-30 NM_001033435:-30 NR_073165:-30 AK153506:41 |
TATA-Box annotation
| Distance to TSS: | 42 |
|---|---|
| Nearest PromoterID: | NR_073165 |
| Entrez ID: | 380732 |
| Nearest Unigene: | Mm.343952 |
| Nearest Refseq: | NM_001033435 |
| Nearest Ensembl: | ENSMUSG00000040528 |
| Gene Name: | mast cell immunoglobulin like receptor 1 |
| Gene Alias: | Allergin-1|Gm885|Mca32 |
| Gene Description: | mast cell immunoglobulin like receptor 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.025 |
| GC%: | 0.472637 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
